| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033544 | 4:27,768,037-27,768,366 | + | - | - | - | - | - | Detail |
| CX4g034888 | 4:27,852,661-27,852,822 | - | - | - | - | - | - | Detail |
| CX4g034564 | 4:27,856,978-27,860,310 | + | C1H4g18527 | C2H4g23622 | LOC_Os04g54200 | Os04g0634700 | OsDGK1, OsBIDK1 | Detail |
| CX4g034330 | 4:27,861,503-27,861,775 | + | - | C2H4g02149 | LOC_Os04g54210 | Os04g0634800 | - | Detail |
| CX4g031499 | 4:27,862,683-27,862,940 | - | - | C2H4g22519 | LOC_Os04g54220 | Os04g0634900 | - | Detail |
| CX4g036119 | 4:27,864,108-27,867,520 | - | C1H4g25616 | C2H4g00720 | LOC_Os04g54230 | Os04g0635000 | - | Detail |
| CX4g031890 | 4:27,896,926-27,897,507 | - | C1H4g25616 | C2H4g00720 | LOC_Os04g54240 | Os04g0635100 | - | Detail |
| CX4g032804 | 4:27,897,850-27,898,573 | + | C1H4g19305 | C2H4g14023 | LOC_Os04g54320 | Os04g0635700 | - | Detail |
| CX4g036509 | 4:27,900,919-27,901,518 | - | C1H4g09101 | C2H4g17468 | LOC_Os04g54330 | Os04g0635800 | - | Detail |
| CX4g032454 | 4:27,902,426-27,907,378 | + | C1H4g30286 | C2H4g13240 | LOC_Os04g54340 | Os04g0635900 | OsMRE11, MRE11 | Detail |
| CX4g032200 | 4:27,907,905-27,910,929 | - | C1H4g21961 | C2H4g02572 | LOC_Os04g54350 | Os04g0636000 | - | Detail |
| CX4g036026 | 4:27,913,362-27,915,168 | + | C1H4g08947 | C2H4g10937 | LOC_Os04g54360 | Os04g0636100 | - | Detail |
| CX4g034633 | 4:27,916,112-27,918,140 | - | C1H4g20538 | C2H4g03815 | LOC_Os04g54370 | Os04g0636200 | - | Detail |
| CX4g032673 | 4:27,919,358-27,922,061 | - | C1H4g15693 | C2H4g22493 | LOC_Os04g54380 | Os04g0636300 | - | Detail |
| CX4g035086 | 4:27,922,488-27,924,263 | + | C1H4g21474 | C2H4g23314 | LOC_Os04g54390 | Os04g0636400 | - | Detail |
| CX4g031535 | 4:27,925,796-27,929,225 | + | C1H4g17142 | C2H4g20784 | LOC_Os04g54400 | Os04g0636500 | - | Detail |
| CX4g033827 | 4:27,929,820-27,937,316 | - | C1H4g09780 | C2H4g25587 | LOC_Os04g54410 | Os04g0636600 | - | Detail |
| CX4g035918 | 4:27,938,379-27,941,044 | - | C1H4g08442 | C2H4g20756 | LOC_Os04g54420 | Os04g0636700 | - | Detail |
| CX4g036410 | 4:27,943,208-27,945,262 | - | C1H4g15395 | C2H4g00944 | LOC_Os04g54430 | Os04g0636800 | - | Detail |
| CX4g032414 | 4:27,949,971-27,951,518 | - | - | C2H4g12875 | LOC_Os04g54440 | Os04g0636900 | - | Detail |