| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17042 | 4:20,797,046-20,800,398 | - | C1H4g31403 | CX4g036343 | LOC_Os04g40650 | Os04g0482700 | - | Detail |
| C2H4g09234 | 4:20,801,204-20,805,683 | - | C1H4g18067 | CX4g032655 | LOC_Os04g40660 | Os04g0482800 | - | Detail |
| C2H4g06345 | 4:20,806,844-20,811,942 | - | C1H4g04900 | CX4g032113 | LOC_Os04g40670 | Os04g0482900 | - | Detail |
| C2H4g21173 | 4:20,815,477-20,817,018 | + | C1H4g26441 | CX4g035699 | LOC_Os04g40680 | Os04g0483000 | - | Detail |
| C2H4g26991 | 4:20,827,642-20,832,109 | + | C1H4g10284 | CX4g036074 | LOC_Os04g40700 | Os04g0483200 | - | Detail |
| C2H4g13170 | 4:20,832,265-20,838,730 | - | C1H4g11147 | CX4g035331 | LOC_Os04g40720 | Os04g0483400 | OsSUBSrP1 | Detail |
| C2H4g15487 | 4:20,840,358-20,843,372 | - | C1H4g14843 | CX4g031522 | LOC_Os04g40730 | Os04g0483500 | KCR1, OsKCR1, WSL3 | Detail |
| C2H4g03640 | 4:20,845,395-20,852,309 | - | C1H4g00579 | CX4g033297 | LOC_Os04g40740 | Os04g0483600 | - | Detail |
| C2H4g28314 | 4:20,861,023-20,862,867 | - | C1H4g22602 | CX4g032598 | LOC_Os04g40760 | Os04g0651600 | - | Detail |
| C2H4g03392 | 4:20,871,565-20,879,184 | + | C1H4g19344 | CX4g034516 | LOC_Os04g40830 | Os04g0484800 | - | Detail |
| C2H4g06907 | 4:20,879,589-20,882,951 | - | C1H4g05361 | CX4g032355 | LOC_Os04g40840 | Os04g0484900 | OsELP3 | Detail |
| C2H4g29472 | 4:20,883,277-20,885,991 | + | C1H4g09149 | CX4g035127 | LOC_Os04g40850 | Os04g0485000 | OsRpn7 | Detail |
| C2H4g14931 | 4:20,886,151-20,890,107 | - | C1H4g21128 | CX4g034685 | LOC_Os04g40860 | Os04g0485100 | - | Detail |
| C2H4g07215 | 4:20,894,500-20,897,610 | + | C1H4g16250 | CX4g032126 | LOC_Os04g40870 | Os04g0485200 | - | Detail |
| C2H4g19727 | 4:20,901,679-20,907,974 | + | C1H4g02206 | CX4g032384 | LOC_Os04g40874 | Os04g0485300 | - | Detail |
| C2H4g08090 | 4:20,902,491-20,910,357 | - | C1H4g05914 | CX4g033307 | LOC_Os04g40880 | Os04g0485400 | - | Detail |
| C2H4g07501 | 4:20,911,718-20,913,987 | + | C1H8g13693 | CX4g032119 | LOC_Os04g40900 | Os04g0485700 | - | Detail |
| C2H4g25528 | 4:20,915,296-20,918,861 | - | C1H4g23020 | CX4g031550 | LOC_Os04g40910 | Os04g0485800 | - | Detail |
| C2H4g07670 | 4:20,925,719-20,927,142 | + | C1H4g01634 | CX4g034598 | LOC_Os04g40920 | Os04g0486300 | - | Detail |
| C2H4g08395 | 4:20,928,040-20,932,453 | + | C1H4g05039 | CX4g034598 | LOC_Os04g40930 | Os04g0486400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |