| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25243 | 1:9,925,968-9,926,322 | + | C1H1g07961 | CX1g005625 | - | Os01g0302000 | - | Detail |
| C2H1g20277 | 1:9,951,234-9,952,088 | + | C1H1g08220 | CX1g001886 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| C2H1g00180 | 1:9,957,331-9,958,080 | + | C1H1g25873 | CX1g003033 | LOC_Os01g19694 | Os01g0302500 | OSH6 | Detail |
| C2H1g08564 | 1:9,967,966-9,968,197 | + | C1H1g01787 | CX1g002448 | LOC_Os01g13880 | Os01g0302900 | - | Detail |
| C2H1g22139 | 1:9,984,114-9,994,488 | + | C1H1g30343 | CX1g002241 | LOC_Os01g19760 | Os01g0303200 | - | Detail |
| C2H1g28692 | 1:9,995,029-9,996,069 | - | C1H1g08611 | CX1g005267 | LOC_Os01g19770 | Os01g0303300 | - | Detail |
| C2H1g03869 | 1:9,996,607-9,997,729 | + | C1H1g06976 | CX1g003424 | - | - | - | Detail |
| C2H1g08897 | 1:10,004,354-10,007,288 | - | C1H1g10454 | CX1g005002 | LOC_Os01g19800 | Os01g0303600 | - | Detail |
| C2H1g15081 | 1:10,017,771-10,019,206 | + | C1H1g12064 | CX1g007072 | LOC_Os01g19820 | Os01g0303800 | - | Detail |
| C2H1g09569 | 1:10,020,364-10,021,461 | - | C1H1g07873 | CX1g004233 | LOC_Os01g19840 | Os01g0304000 | - | Detail |
| C2H1g00615 | 1:10,022,779-10,028,629 | - | C1H1g30320 | CX1g006405 | LOC_Os01g19850 | Os01g0304100 | - | Detail |
| C2H1g15223 | 1:10,033,465-10,035,345 | - | C1H1g22126 | - | LOC_Os01g19860 | - | - | Detail |
| C2H1g20818 | 1:10,068,895-10,074,764 | + | C1H1g19979 | CX1g002819 | LOC_Os01g19870 | Os01g0304300 | - | Detail |
| C2H1g11426 | 1:10,090,209-10,093,201 | + | C1H1g14352 | CX1g002390 | LOC_Os01g19940 | Os01g0305200 | - | Detail |
| C2H1g02664 | 1:10,116,652-10,116,918 | + | C1H1g30123 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C2H1g18264 | 1:10,122,324-10,123,274 | + | C1H1g25851 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C2H1g03786 | 1:10,131,064-10,131,853 | - | C1H1g22584 | CX1g003842 | LOC_Os01g19990 | Os01g0306100 | - | Detail |
| C2H1g25465 | 1:10,154,086-10,155,002 | + | C1H1g06359 | - | - | - | - | Detail |
| C2H1g16908 | 1:10,162,830-10,171,651 | + | C1H1g06007 | CX1g007219 | LOC_Os01g20110 | Os01g0306800 | - | Detail |
| C2H1g17380 | 1:10,178,101-10,183,151 | - | C1H1g03989 | CX1g002507 | LOC_Os01g20120 | Os01g0306900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |