| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07378 | 1:34,453,638-34,455,892 | + | C1H1g17352 | CX1g002421 | LOC_Os01g67170 | Os01g0897100 | - | Detail |
| C2H1g16084 | 1:34,456,887-34,459,759 | - | C1H1g14594 | CX1g007222 | LOC_Os01g67180 | Os01g0897200 | - | Detail |
| C2H1g21261 | 1:34,460,481-34,463,439 | - | C1H1g18893 | CX1g007222 | LOC_Os01g67190 | Os01g0897300 | - | Detail |
| C2H1g08138 | 1:34,472,390-34,477,396 | + | C1H1g13480 | CX1g005094 | LOC_Os01g67220 | Os01g0897600 | Os1βGlu4 | Detail |
| C2H1g29857 | 1:34,478,866-34,479,075 | + | C1H1g21764 | - | - | Os08g0170400 | - | Detail |
| C2H1g28742 | 1:34,482,265-34,486,398 | - | C1H1g31716 | CX1g001233 | LOC_Os01g67240 | Os01g0897700 | OsFH1 | Detail |
| C2H1g17165 | 1:34,494,460-34,504,501 | - | C1H1g23647 | CX1g000742 | LOC_Os01g67250 | Os01g0897800 | - | Detail |
| C2H1g15809 | 1:34,510,496-34,511,380 | + | C1H4g20867 | CX1g002092 | LOC_Os12g34470 | Os01g0198900 | - | Detail |
| C2H1g12889 | 1:34,530,965-34,537,663 | - | C1H1g27730 | CX1g005478 | LOC_Os01g67290 | Os01g0898300 | - | Detail |
| C2H1g09014 | 1:34,542,385-34,544,496 | + | C1H1g09687 | CX1g002008 | LOC_Os01g67300 | Os01g0898400 | - | Detail |
| C2H1g04830 | 1:34,544,865-34,547,006 | + | C1H1g23893 | CX1g006649 | LOC_Os01g67310 | Os01g0898500 | - | Detail |
| C2H1g01136 | 1:34,549,618-34,551,954 | - | C1H1g03088 | CX1g000739 | LOC_Os01g67314 | Os01g0898600 | - | Detail |
| C2H1g30021 | 1:34,558,306-34,560,031 | + | C1H1g20281 | CX1g001366 | - | Os01g0898800 | - | Detail |
| C2H1g25365 | 1:34,563,759-34,568,620 | + | C1H1g13611 | CX1g002818 | LOC_Os01g67330 | Os01g0898900 | - | Detail |
| C2H1g14239 | 1:34,570,481-34,572,648 | - | C1H1g22738 | CX1g005754 | LOC_Os01g67340 | Os01g0899000 | - | Detail |
| C2H1g12354 | 1:34,586,748-34,589,757 | - | C1H1g16761 | CX1g003678 | LOC_Os01g67360 | Os01g0899200 | - | Detail |
| C2H1g12009 | 1:34,594,532-34,599,845 | - | C1H1g13163 | CX1g003648 | LOC_Os01g67370 | Os01g0899500 | - | Detail |
| C2H1g06986 | 1:34,602,702-34,604,341 | - | C1H1g18275 | CX1g003014 | LOC_Os01g67390 | Os01g0899700 | COG2 | Detail |
| C2H1g13678 | 1:34,606,600-34,610,224 | - | C1H1g21259 | CX1g005480 | LOC_Os01g67410 | Os01g0899800 | - | Detail |
| C2H1g15739 | 1:34,620,158-34,626,878 | + | C1H1g15270 | CX1g001856 | LOC_Os01g67420 | Os01g0900200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |