| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g20616 | 9:18,382,344-18,383,531 | + | C1H9g22751 | CX9g055014 | LOC_Os09g37570 | Os09g0547800 | - | Detail |
| C2H9g03194 | 9:18,384,647-18,392,862 | + | C1H9g10886 | CX9g055014 | LOC_Os09g37580 | Os09g0547900 | - | Detail |
| C2H9g25660 | 9:18,395,735-18,397,363 | + | C1H9g26807 | CX9g055014 | LOC_Os09g37590 | Os09g0548066 | - | Detail |
| C2H9g22088 | 9:18,398,218-18,401,904 | + | C1H9g12329 | CX9g058170 | LOC_Os09g37590 | Os09g0548100 | - | Detail |
| C2H9g30052 | 9:18,405,628-18,408,485 | + | C1H9g18410 | CX9g056357 | LOC_Os09g37600 | Os09g0548200 | - | Detail |
| C2H9g14355 | 9:18,409,257-18,415,433 | + | C1H9g24811 | CX9g055652 | LOC_Os09g37610 | Os09g0548300 | - | Detail |
| C2H9g00853 | 9:18,414,508-18,416,913 | - | C1H9g07737 | CX9g058080 | LOC_Os09g37620 | Os09g0548400 | - | Detail |
| C2H9g10997 | 9:18,421,265-18,424,277 | - | C1H9g05052 | CX9g055964 | LOC_Os09g37650 | Os09g0548700 | - | Detail |
| C2H9g07332 | 9:18,424,736-18,425,071 | + | C1H9g28634 | - | - | - | - | Detail |
| C2H9g30567 | 9:18,443,679-18,445,536 | - | C1H9g02279 | CX9g058080 | LOC_Os09g37690 | Os09g0549300 | - | Detail |
| C2H9g13697 | 9:18,449,021-18,450,525 | + | C1H9g28309 | CX9g055037 | LOC_Os09g37700 | Os09g0549400 | - | Detail |
| C2H9g27020 | 9:18,455,260-18,460,257 | + | C1H9g00407 | CX9g055826 | LOC_Os09g37710 | Os09g0549450 | OsNLP4 | Detail |
| C2H9g00777 | 9:18,462,214-18,462,993 | - | C1H9g10891 | CX9g057808 | LOC_Os09g37720 | Os09g0549500 | - | Detail |
| C2H9g07668 | 9:18,463,897-18,464,983 | + | C1H9g05700 | CX9g055520 | LOC_Os09g37730 | Os09g0549600 | - | Detail |
| C2H9g00404 | 9:18,465,274-18,465,642 | - | C1H9g13469 | CX9g057767 | LOC_Os09g37740 | Os09g0549700 | - | Detail |
| C2H9g30039 | 9:18,473,893-18,479,679 | - | C1H9g12992 | CX9g057557 | LOC_Os09g37760 | Os09g0550000 | - | Detail |
| C2H9g28864 | 9:18,483,872-18,485,489 | - | C1H9g06547 | CX9g057667 | LOC_Os09g37840 | Os09g0550300 | SDRLP-7 | Detail |
| C2H9g09987 | 9:18,485,562-18,488,481 | - | C1H9g06547 | CX9g057667 | LOC_Os09g37780 | Os09g0550300 | SDRLP-7 | Detail |
| C2H9g20822 | 9:18,491,086-18,493,885 | - | C1H9g16111 | CX9g057667 | LOC_Os09g37790 | Os09g0550500 | - | Detail |
| C2H9g18589 | 9:18,499,312-18,502,588 | - | C1H9g29171 | CX9g057667 | LOC_Os09g37800 | Os09g0550600 | SDRLK-46 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |