| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g16567 | 4:22,385,420-22,394,539 | + | C2H4g12957 | CX4g031530 | LOC_Os04g43350 | Os04g0513000 | - | Detail |
| C1H4g14420 | 4:22,396,187-22,400,156 | - | C2H4g12895 | - | LOC_Os04g43360 | Os04g0513100 | Os4BGlu14 | Detail |
| C1H4g08587 | 4:22,400,954-22,401,616 | - | - | - | - | - | - | Detail |
| C1H4g17289 | 4:22,403,401-22,403,721 | + | - | - | - | - | - | Detail |
| C1H4g08841 | 4:22,405,433-22,410,516 | - | C2H4g14566 | - | LOC_Os04g43390 | Os04g0513400 | - | Detail |
| C1H4g03090 | 4:22,418,042-22,423,546 | - | C2H4g12844 | - | LOC_Os04g43390 | Os04g0513400 | - | Detail |
| C1H4g31804 | 4:22,427,255-22,432,609 | - | C2H4g08699 | - | LOC_Os04g43410 | Os04g0513900 | Os4BGlu18 | Detail |
| C1H4g08265 | 4:22,436,842-22,439,017 | + | C2H4g06239 | CX4g035316 | LOC_Os04g43420 | Os04g0514400 | - | Detail |
| C1H4g12183 | 4:22,440,085-22,443,189 | - | C2H4g25755 | CX4g032808 | LOC_Os04g43430 | Os04g0514500 | - | Detail |
| C1H4g00643 | 4:22,444,384-22,451,296 | - | C2H4g28560 | CX4g032578 | LOC_Os04g43440 | Os04g0514600 | - | Detail |
| C1H4g05501 | 4:22,454,717-22,458,978 | - | C2H4g20498 | CX4g035553 | LOC_Os04g43490 | Os04g0514800 | - | Detail |
| C1H4g03273 | 4:22,469,596-22,471,765 | - | C2H4g19370 | CX4g034547 | LOC_Os02g40880 | Os04g0515300 | - | Detail |
| C1H4g25523 | 4:22,472,211-22,475,124 | + | C2H4g03762 | CX4g032382 | LOC_Os04g43550 | Os04g0515400 | - | Detail |
| C1H4g27910 | 4:22,488,951-22,491,346 | + | C2H4g24134 | CX4g031507 | LOC_Os04g43560 | Os04g0515900 | - | Detail |
| C1H4g02431 | 4:22,495,475-22,496,326 | - | C2H4g24189 | CX4g035165 | - | - | - | Detail |
| C1H4g12776 | 4:22,504,082-22,504,684 | - | C2H4g12828 | - | LOC_Os04g43580 | Os04g0516200 | OsG1L4 | Detail |
| C1H4g23819 | 4:22,525,358-22,527,918 | - | C2H4g21844 | CX4g034816 | LOC_Os04g43650 | Os04g0516600 | - | Detail |
| C1H4g30570 | 4:22,533,692-22,535,146 | + | C2H4g17407 | CX4g035460 | LOC_Os04g43660 | Os04g0516900 | - | Detail |
| C1H4g13624 | 4:22,535,995-22,537,726 | + | C2H4g08355 | CX4g032257 | LOC_Os04g43670 | Os04g0517000 | - | Detail |
| C1H4g07527 | 4:22,543,228-22,545,213 | - | C2H4g12515 | CX4g033299 | LOC_Os04g43680 | Os04g0517100 | OsMyb4, MYB55 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |