| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g01220 | 2:20,921,183-20,924,483 | + | C2H2g03103 | CX2g021254 | LOC_Os02g36830 | Os02g0578300 | - | Detail |
| C1H2g00922 | 2:20,946,575-20,947,099 | + | C2H2g03296 | CX2g023475 | LOC_Os02g36840 | Os02g0578300 | - | Detail |
| C1H2g12223 | 2:20,947,200-20,948,123 | + | C2H2g18710 | CX2g023475 | LOC_Os02g36840 | Os02g0578300 | - | Detail |
| C1H2g01292 | 2:20,950,650-20,950,853 | + | C2H2g02007 | - | - | - | - | Detail |
| C1H2g06701 | 2:20,951,753-20,952,518 | + | C2H2g22661 | CX2g022311 | LOC_Os02g36845 | Os02g0578366 | - | Detail |
| C1H2g12184 | 2:20,952,770-20,953,591 | - | C2H2g25438 | CX2g019034 | LOC_Os02g36850 | Os02g0578400 | - | Detail |
| C1H2g05663 | 2:20,969,799-20,972,278 | + | C2H2g08310 | CX2g020613 | LOC_Os02g36870 | Os02g0578800 | - | Detail |
| C1H2g22548 | 2:20,984,330-20,985,683 | + | C2H2g22800 | CX2g021043 | LOC_Os02g36880 | Os02g0579000 | OMTN1, OsNAC1, ONAC027 | Detail |
| C1H2g22905 | 2:20,993,174-20,995,326 | + | C2H2g23054 | CX2g020159 | LOC_Os02g36890 | Os02g0579300 | Os2R_MYB24 | Detail |
| C1H2g30138 | 2:21,002,650-21,005,088 | + | - | - | - | - | - | Detail |
| C1H2g25560 | 2:21,023,970-21,030,642 | + | C2H2g12567 | CX2g024371 | LOC_Os02g36924 | Os02g0579600 | OsMADS27 | Detail |
| C1H2g25177 | 2:21,028,015-21,034,786 | - | - | CX2g019336 | - | - | - | Detail |
| C1H2g29783 | 2:21,038,320-21,039,025 | - | C2H2g18769 | CX2g022569 | LOC_Os02g36940 | Os02g0579800 | - | Detail |
| C1H2g05339 | 2:21,046,970-21,047,940 | - | C2H2g04321 | CX2g019101 | LOC_Os02g36950 | Os02g0580000 | OsFWL3 | Detail |
| C1H2g18548 | 2:21,054,913-21,059,126 | - | C2H2g23636 | CX2g019072 | LOC_Os02g36960 | Os02g0580100 | - | Detail |
| C1H2g27466 | 2:21,061,137-21,064,884 | + | C2H2g06520 | CX2g020310 | LOC_Os02g36974 | Os02g0580300 | GID2, OsGID2 | Detail |
| C1H2g18097 | 2:21,069,264-21,070,525 | + | C2H2g00081 | - | - | - | - | Detail |
| C1H2g19691 | 2:21,070,602-21,072,605 | - | C2H2g29316 | CX2g020734 | LOC_Os02g36990 | Os02g0580400 | - | Detail |
| C1H2g22947 | 2:21,083,495-21,084,163 | + | C2H2g07280 | CX2g022849 | LOC_Os02g37010 | Os02g0580600 | - | Detail |
| C1H2g19515 | 2:21,084,271-21,085,898 | + | C2H2g07280 | CX2g022849 | LOC_Os02g37010 | Os02g0580600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |