| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g28046 | 12:12,223,758-12,226,091 | - | - | CX12g015966 | LOC_Os12g24330 | Os12g0431300 | - | Detail |
| C1H12g16885 | 12:12,240,341-12,242,141 | + | C2H12g16529 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C1H12g31271 | 12:12,261,135-12,262,103 | - | C2H12g01862 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C1H12g09328 | 12:12,299,852-12,300,409 | + | C2H12g10767 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C1H12g17763 | 12:12,320,549-12,321,667 | - | - | - | - | - | - | Detail |
| C1H12g01818 | 12:12,334,770-12,342,916 | - | C2H12g22841 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C1H12g23644 | 12:12,348,647-12,360,635 | - | C2H12g15618 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C1H12g14351 | 12:12,369,190-12,371,519 | + | C2H12g05476 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C1H12g23524 | 12:12,426,868-12,432,465 | + | C2H12g01529 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C1H12g19273 | 12:12,517,610-12,520,527 | - | C2H12g00049 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C1H12g05019 | 12:12,569,864-12,570,082 | - | C2H12g11113 | CX12g015912 | - | Os12g0548401 | - | Detail |
| C1H12g22930 | 12:12,583,474-12,584,084 | - | C2H12g23339 | CX12g016320 | LOC_Os12g25120 | Os12g0438000 | - | Detail |
| C1H12g20658 | 12:12,589,815-12,590,260 | - | C2H12g21121 | CX12g017421 | LOC_Os12g25130 | Os12g0438100 | - | Detail |
| C1H12g03456 | 12:12,628,202-12,629,902 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25170 | Os12g0438300 | - | Detail |
| C1H12g23538 | 12:12,632,212-12,634,841 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25180 | Os12g0438400 | - | Detail |
| C1H12g00042 | 12:12,695,178-12,698,618 | - | C2H12g29393 | CX12g018260 | LOC_Os12g25200 | Os12g0438600 | - | Detail |
| C1H12g27556 | 12:12,709,992-12,710,282 | - | C2H12g10340 | - | LOC_Os12g25210 | Os12g0438900 | - | Detail |
| C1H12g10711 | 12:12,915,027-12,916,445 | + | - | - | LOC_Os09g04680 | - | - | Detail |
| C1H12g03044 | 12:12,918,225-12,920,540 | - | C2H12g16836 | CX12g018024 | LOC_Os12g25450 | Os12g0441300 | OsASMT18 | Detail |
| C1H12g28305 | 12:12,954,451-12,956,333 | - | C2H12g23920 | CX12g016162 | LOC_Os12g25490 | Os12g0441600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |