| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10728 | 9:16,830,371-16,832,276 | + | C2H9g26463 | CX9g055900 | LOC_Os09g34230 | Os09g0518000 | OsUGT74H4 | Detail |
| C1H9g19198 | 9:16,838,064-16,839,569 | + | C2H9g02520 | CX9g054966 | LOC_Os09g34250 | Os09g0518200 | OsSGT1 | Detail |
| C1H9g30947 | 9:16,844,284-16,845,772 | + | C2H9g22734 | CX9g055928 | LOC_Os09g34270 | Os09g0518400 | - | Detail |
| C1H9g09147 | 9:16,852,135-16,856,191 | + | C2H9g08049 | CX9g055676 | LOC_Os09g34280 | Os09g0518500 | - | Detail |
| C1H9g05389 | 9:16,857,063-16,858,689 | - | C2H9g03145 | CX9g056764 | LOC_Os09g34290 | Os09g0518600 | - | Detail |
| C1H9g00022 | 9:16,859,212-16,863,946 | - | C2H9g00047 | CX9g055254 | LOC_Os09g34300 | Os09g0518700 | - | Detail |
| C1H9g22729 | 9:16,866,758-16,867,299 | + | C2H9g05387 | CX9g057932 | LOC_Os09g34310 | - | - | Detail |
| C1H9g23239 | 9:16,872,391-16,873,428 | - | - | CX9g056160 | LOC_Os09g34320 | Os09g0518900 | - | Detail |
| C1H9g17507 | 9:16,882,934-16,883,785 | - | C2H9g03669 | CX9g055953 | LOC_Os09g34330 | Os09g0519100 | - | Detail |
| C1H9g15652 | 9:16,900,586-16,901,373 | - | C2H9g27958 | - | - | - | - | Detail |
| C1H9g11494 | 9:16,902,311-16,902,511 | - | C2H1g00715 | CX9g055320 | LOC_Os12g03160 | - | - | Detail |
| C1H9g20303 | 9:16,915,583-16,916,061 | - | C2H9g09976 | CX9g055247 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| C1H9g03744 | 9:16,920,848-16,923,558 | + | C2H9g00711 | CX9g055700 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| C1H9g28676 | 9:16,924,601-16,926,496 | + | C2H9g07064 | CX9g057087 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| C1H9g02310 | 9:16,929,155-16,932,585 | + | C2H9g21344 | CX9g057384 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| C1H9g04530 | 9:16,933,479-16,934,397 | - | C2H9g01771 | CX9g055638 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| C1H9g24828 | 9:16,939,968-16,941,371 | + | C2H9g21190 | CX9g056986 | LOC_Os09g32780 | - | - | Detail |
| C1H9g25767 | 9:16,944,020-16,947,414 | - | C2H9g04653 | CX9g055686 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| C1H9g15041 | 9:16,949,494-16,953,854 | + | C2H9g24414 | CX9g058165 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| C1H9g08027 | 9:16,955,910-16,957,580 | - | C2H9g26435 | CX9g057097 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033748 | 4:27,001,735-27,004,269 | - | C1H4g24641 | C2H4g18841 | LOC_Os04g52860 | Os04g0619600 | - | Detail |
| CX4g034589 | 4:27,008,445-27,010,133 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g52870 | Os04g0619700 | - | Detail |
| CX4g036286 | 4:27,024,466-27,029,232 | + | C1H4g18235 | C2H4g06612 | LOC_Os04g52890 | Os04g0619900 | - | Detail |
| CX4g032062 | 4:27,030,313-27,041,377 | - | C1H4g18046 | C2H4g03746 | LOC_Os04g52900 | Os04g0620000 | MRP1, OsABCC1, OsABCC1-1, OsABCC1-2, OsMRP1 | Detail |
| CX4g031727 | 4:27,043,067-27,043,309 | - | - | - | - | - | - | Detail |
| CX4g031475 | 4:27,050,597-27,052,716 | + | C1H4g11396 | C2H4g02835 | LOC_Os04g52920 | Os04g0620200 | GSD1, OsREM6.6, REM6.6 | Detail |
| CX4g032286 | 4:27,060,768-27,068,998 | + | C1H4g24139 | C2H4g19928 | LOC_Os04g52940 | Os04g0620500 | - | Detail |
| CX4g031575 | 4:27,069,742-27,070,218 | - | C1H4g13879 | C2H4g26723 | LOC_Os04g52950 | Os04g0620600 | - | Detail |
| CX4g033766 | 4:27,073,279-27,078,343 | + | C1H4g14650 | C2H4g15421 | LOC_Os04g52960 | Os04g0620700 | OsNUC1-S | Detail |
| CX4g035632 | 4:27,135,931-27,151,617 | + | C1H4g13741 | C2H4g09962 | LOC_Os04g53030 | Os04g0621500 | - | Detail |
| CX4g031411 | 4:27,194,494-27,194,718 | + | C1H11g28053 | C2H11g20881 | LOC_Os11g12810 | Os11g0236100 | - | Detail |
| CX4g031650 | 4:27,196,070-27,202,128 | + | C1H4g26346 | C2H4g19695 | LOC_Os04g53160 | Os04g0623066 | - | Detail |
| CX4g033336 | 4:27,206,842-27,207,198 | - | - | - | - | - | - | Detail |
| CX4g032834 | 4:27,213,021-27,213,227 | - | - | - | - | - | - | Detail |
| CX4g032033 | 4:27,232,681-27,240,940 | - | C1H4g07870 | C2H4g06364 | LOC_Os04g53170 | Os04g0622800 | - | Detail |
| CX4g034503 | 4:27,245,922-27,250,724 | + | C1H4g11379 | C2H4g25020 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g031737 | 4:27,301,550-27,306,238 | + | C1H4g26346 | C2H4g04661 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g033709 | 4:27,328,194-27,328,538 | - | C1H4g02455 | C2H4g00348 | - | Os04g0622501 | - | Detail |
| CX4g033044 | 4:27,329,391-27,334,562 | + | C1H4g26346 | C2H4g08898 | LOC_Os04g53120 | Os04g0622600 | Xa1 | Detail |
| CX4g035590 | 4:27,335,963-27,337,361 | - | C1H4g09095 | C2H4g04050 | LOC_Os04g53170 | Os04g0623100 | - | Detail |