| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05932 | 5:924,833-928,799 | - | C2H5g20475 | CX5g039871 | LOC_Os05g02820 | Os05g0119700 | - | Detail |
| C1H5g25594 | 5:943,281-945,395 | - | C2H5g27318 | CX5g040974 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| C1H5g31585 | 5:977,467-982,443 | + | C2H5g09848 | CX5g037865 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| C1H5g20255 | 5:985,138-986,734 | + | C2H5g03610 | CX5g040092 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| C1H5g25679 | 5:997,164-998,437 | + | C2H5g24004 | CX5g038448 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| C1H5g01702 | 5:1,001,069-1,008,762 | + | C2H5g03745 | CX5g038251 | - | Os05g0121100 | - | Detail |
| C1H5g21915 | 5:1,012,216-1,016,443 | - | C2H5g13518 | CX5g038381 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| C1H5g23502 | 5:1,017,735-1,022,979 | + | C2H5g27724 | CX5g037956 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| C1H5g18884 | 5:1,030,945-1,035,254 | - | C2H5g29033 | CX5g038220 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C1H5g22491 | 5:1,060,140-1,064,909 | - | C2H5g03539 | CX5g039481 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| C1H5g25689 | 5:1,071,694-1,075,687 | + | C2H5g07687 | CX5g038840 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| C1H5g18041 | 5:1,075,746-1,077,506 | - | C2H5g05750 | CX5g041093 | LOC_Os05g03070 | Os05g0121900 | - | Detail |
| C1H5g13312 | 5:1,086,909-1,095,059 | + | C2H5g19920 | CX5g040056 | LOC_Os05g03100 | Os05g0122400 | - | Detail |
| C1H5g19743 | 5:1,095,083-1,096,561 | - | C2H5g29150 | CX5g040504 | LOC_Os05g03110 | Os05g0122500 | - | Detail |
| C1H5g02473 | 5:1,104,967-1,108,773 | + | C2H5g04039 | CX5g037677 | LOC_Os05g03120 | Os05g0122600 | - | Detail |
| C1H5g18506 | 5:1,109,543-1,109,884 | - | C2H5g14986 | CX3g026690 | LOC_Os05g03130 | Os05g0122700 | - | Detail |
| C1H5g28175 | 5:1,120,308-1,124,274 | + | C2H5g02194 | CX5g039466 | LOC_Os05g03140 | Os05g0122800 | - | Detail |
| C1H5g12318 | 5:1,125,348-1,127,698 | - | C2H5g07267 | CX5g037843 | LOC_Os05g03150 | Os05g0122900 | OsBLE1 | Detail |
| C1H5g28350 | 5:1,132,427-1,132,855 | - | C2H5g27198 | CX5g040830 | LOC_Os05g03160 | Os05g0123000 | - | Detail |
| C1H5g07212 | 5:1,132,902-1,133,171 | - | C2H5g14651 | CX5g040717 | LOC_Os05g07270 | Os05g0417000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000781 | 1:21,018,996-21,021,698 | + | C1H1g27582 | C2H1g21410 | LOC_Os01g41510 | Os01g0598200 | OsCBL5 | Detail |
| CX1g004325 | 1:21,023,274-21,025,181 | - | C1H1g02719 | C2H1g17362 | LOC_Os01g41530 | Os01g0598400 | - | Detail |
| CX1g003552 | 1:21,028,265-21,029,284 | + | C1H1g20732 | C2H1g22549 | LOC_Os01g41550 | Os01g0598600 | - | Detail |
| CX1g002935 | 1:21,032,796-21,032,948 | + | - | - | - | - | - | Detail |
| CX1g004090 | 1:21,042,563-21,043,960 | - | - | C2H8g16256 | - | Os09g0274025 | - | Detail |
| CX1g002941 | 1:21,049,409-21,055,390 | - | C1H1g13935 | C2H1g01266 | LOC_Os01g41565 | Os01g0598900 | - | Detail |
| CX1g002056 | 1:21,058,493-21,058,645 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001518 | 1:21,059,643-21,060,044 | + | - | - | LOC_Os02g52316 | Os02g0760600 | - | Detail |
| CX1g002962 | 1:21,059,681-21,060,007 | - | - | - | - | - | - | Detail |
| CX1g002279 | 1:21,063,911-21,065,958 | + | C1H1g10429 | C2H1g01189 | LOC_Os01g41600 | Os01g0599900 | - | Detail |
| CX1g005403 | 1:21,066,572-21,069,359 | - | C1H1g29825 | C2H1g21759 | LOC_Os01g41610 | Os01g0600000 | - | Detail |
| CX1g002171 | 1:21,074,558-21,080,845 | + | C1H1g25192 | C2H1g02182 | LOC_Os01g41630 | Os01g0600200 | - | Detail |
| CX1g001679 | 1:21,081,900-21,084,893 | + | C1H1g30617 | C2H1g28265 | LOC_Os01g41640 | Os01g0600300 | - | Detail |
| CX1g002399 | 1:21,086,246-21,088,414 | + | C1H1g19876 | C2H1g28719 | LOC_Os01g41650 | Os01g0600400 | - | Detail |
| CX1g006638 | 1:21,088,882-21,090,278 | - | C1H1g07112 | C2H1g02571 | LOC_Os01g41660 | Os01g0600500 | - | Detail |
| CX1g005865 | 1:21,091,848-21,092,651 | - | - | - | LOC_Os01g41670 | - | - | Detail |
| CX1g003529 | 1:21,094,225-21,094,515 | - | - | - | - | - | - | Detail |
| CX1g001346 | 1:21,099,751-21,100,536 | + | C1H3g28027 | C2H9g03060 | LOC_Os01g41710 | Os01g0600900 | - | Detail |
| CX1g001544 | 1:21,103,132-21,107,294 | - | C1H1g17742 | C2H1g21712 | LOC_Os01g41720 | Os01g0601000 | - | Detail |
| CX1g003177 | 1:21,115,335-21,119,577 | + | C1H1g23873 | C2H1g00437 | LOC_Os01g41730 | Os01g0601200 | - | Detail |