| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06478 | 1:20,087,439-20,092,420 | - | C1H1g11792 | CX1g003587 | LOC_Os01g40000 | Os01g0581900 | - | Detail |
| C2H1g00382 | 1:20,097,545-20,103,260 | + | C1H1g20195 | - | - | - | - | Detail |
| C2H1g21784 | 1:20,122,454-20,127,640 | - | C1H1g19435 | CX1g000670 | LOC_Os01g40050 | Os01g0582400 | - | Detail |
| C2H1g05686 | 1:20,132,922-20,135,770 | + | C1H1g00267 | CX1g004564 | - | - | - | Detail |
| C2H1g22424 | 1:20,135,819-20,136,232 | + | C1H1g00267 | CX1g004564 | - | - | - | Detail |
| C2H1g13531 | 1:20,154,977-20,160,929 | + | C1H1g12353 | CX1g007125 | LOC_Os01g40094 | Os01g0583100 | - | Detail |
| C2H1g19309 | 1:20,162,454-20,165,202 | - | C1H1g01246 | CX1g005917 | LOC_Os01g40110 | Os01g0583200 | - | Detail |
| C2H1g01103 | 1:20,176,114-20,181,578 | + | C1H1g08692 | CX1g005537 | LOC_Os01g40150 | Os01g0583700 | - | Detail |
| C2H1g12153 | 1:20,186,454-20,190,888 | + | C1H1g06868 | CX1g005854 | LOC_Os01g40170 | Os01g0583900 | - | Detail |
| C2H1g20455 | 1:20,211,105-20,215,729 | - | C1H1g22381 | CX1g005795 | LOC_Os01g40200 | Os01g0584200 | - | Detail |
| C2H1g06413 | 1:20,219,389-20,219,774 | + | C1H1g29279 | CX1g002664 | LOC_Os01g40220 | - | - | Detail |
| C2H1g09575 | 1:20,225,008-20,243,310 | + | C1H1g13029 | CX1g003373 | LOC_Os01g40250 | Os01g0584800 | - | Detail |
| C2H1g22147 | 1:20,246,610-20,247,601 | + | C1H1g07481 | CX1g004043 | LOC_Os01g40260 | Os01g0584900 | OsWRKY77 | Detail |
| C2H1g29926 | 1:20,255,016-20,259,862 | + | C1H1g26514 | CX1g001892 | LOC_Os01g40280 | Os01g0585100 | - | Detail |
| C2H1g05393 | 1:20,260,168-20,260,545 | + | C1H1g31544 | CX1g000231 | LOC_Os01g40290 | Os01g0585200 | - | Detail |
| C2H1g12090 | 1:20,283,908-20,284,565 | - | C1H1g10571 | CX1g005666 | LOC_Os01g40310 | Os01g0585300 | - | Detail |
| C2H1g08627 | 1:20,285,311-20,287,813 | + | C1H1g30790 | CX1g005135 | LOC_Os01g40320 | Os01g0585400 | - | Detail |
| C2H1g14553 | 1:20,293,541-20,298,338 | + | C1H1g23111 | CX1g006239 | LOC_Os01g40330 | Os01g0585600 | - | Detail |
| C2H1g05937 | 1:20,302,781-20,310,527 | + | C1H1g16014 | CX1g001991 | LOC_Os01g40340 | Os01g0585700 | - | Detail |
| C2H1g01742 | 1:20,317,925-20,318,655 | + | C1H1g14894 | CX1g001991 | LOC_Os01g40370 | Os01g0586000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |