| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g11776 | 4:25,433,671-25,435,470 | - | C1H4g16820 | CX4g033099 | LOC_Os04g49610 | Os04g0585600 | - | Detail |
| C2H4g11266 | 4:25,439,551-25,441,167 | - | C1H4g09246 | - | LOC_Os04g49620 | Os04g0585700 | - | Detail |
| C2H4g30476 | 4:25,454,543-25,455,145 | - | C1H4g08474 | - | LOC_Os04g49650 | Os04g0585900 | - | Detail |
| C2H4g22317 | 4:25,459,080-25,459,563 | - | C1H4g14819 | - | LOC_Os04g49660 | Os04g0586000 | - | Detail |
| C2H4g15562 | 4:25,470,204-25,470,497 | - | C1H4g30549 | - | LOC_Os04g49670 | Os04g0586100 | - | Detail |
| C2H4g24989 | 4:25,473,648-25,473,968 | - | C1H4g10022 | - | LOC_Os04g49680 | Os04g0586200 | - | Detail |
| C2H4g18410 | 4:25,488,355-25,489,884 | + | C1H4g24641 | CX4g034550 | LOC_Os04g49690 | Os04g0586500 | - | Detail |
| C2H4g01934 | 4:25,493,577-25,494,656 | + | C1H4g23703 | CX4g033100 | LOC_Os04g49700 | Os04g0586700 | - | Detail |
| C2H4g07006 | 4:25,498,695-25,499,261 | + | - | CX4g036093 | LOC_Os04g49720 | Os04g0587100 | OsINVINH3 | Detail |
| C2H4g20832 | 4:25,500,676-25,501,236 | + | - | CX4g036093 | LOC_Os04g49730 | Os04g0587200 | OsPMEI20 | Detail |
| C2H4g02957 | 4:25,503,576-25,507,184 | + | C1H4g07526 | CX4g035244 | LOC_Os04g49739 | Os04g0587300 | - | Detail |
| C2H4g30591 | 4:25,509,655-25,512,306 | + | C1H4g28454 | CX4g035249 | LOC_Os04g49757 | Os04g0587500 | - | Detail |
| C2H4g11072 | 4:25,517,585-25,518,430 | - | - | CX4g034789 | LOC_Os04g49850 | Os04g0588000 | - | Detail |
| C2H4g10754 | 4:25,521,440-25,531,640 | + | C1H4g11735 | CX4g034668 | LOC_Os04g49860 | Os04g0588200 | OsDNA2_1 | Detail |
| C2H4g21457 | 4:25,532,796-25,534,466 | + | C1H4g26119 | CX4g033123 | LOC_Os04g49870 | Os04g0588350 | - | Detail |
| C2H4g16752 | 4:25,544,587-25,552,061 | + | C1H4g17218 | CX4g033335 | LOC_Os04g49890 | Os04g0588700 | - | Detail |
| C2H4g03312 | 4:25,555,113-25,561,966 | + | C1H4g26451 | CX4g033761 | LOC_Os04g49900 | Os04g0588700 | - | Detail |
| C2H4g21025 | 4:25,582,957-25,584,895 | + | C1H4g17761 | CX4g035587 | LOC_Os04g49940 | Os04g0589200 | - | Detail |
| C2H4g11578 | 4:25,612,721-25,613,421 | + | C1H4g24594 | CX4g031423 | - | - | - | Detail |
| C2H4g03333 | 4:25,638,848-25,641,001 | + | - | CX4g033306 | - | Os04g0589400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |