| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20395 | 4:1,359,383-1,360,828 | + | C1H4g12053 | CX4g033979 | LOC_Os04g03810 | Os04g0121300 | - | Detail |
| C2H4g27171 | 4:1,360,910-1,361,110 | + | C1H4g25987 | CX4g031516 | LOC_Os04g03850 | Os04g0120100 | - | Detail |
| C2H4g25957 | 4:1,371,959-1,381,367 | + | C1H4g01276 | - | - | Os04g0444900 | - | Detail |
| C2H4g10799 | 4:1,384,207-1,386,403 | + | C1H4g15411 | CX4g033227 | LOC_Os04g03796 | Os04g0127100 | - | Detail |
| C2H4g24625 | 4:1,395,696-1,396,126 | + | C1H4g03815 | CX4g033227 | LOC_Os04g03810 | Os04g0127100 | - | Detail |
| C2H4g02044 | 4:1,396,258-1,404,150 | + | C1H4g03815 | CX4g033042 | LOC_Os04g03810 | Os04g0127300 | - | Detail |
| C2H4g17310 | 4:1,408,370-1,417,770 | + | C1H4g15411 | CX4g036594 | LOC_Os04g03810 | Os04g0127600 | - | Detail |
| C2H4g03969 | 4:1,439,730-1,443,620 | + | C1H4g07699 | CX4g034432 | LOC_Os04g03830 | Os04g0127500 | - | Detail |
| C2H4g02699 | 4:1,482,169-1,483,771 | - | C1H4g06729 | CX4g034368 | LOC_Os04g03850 | Os04g0127600 | - | Detail |
| C2H4g13446 | 4:1,484,257-1,489,362 | + | C1H4g09459 | CX4g036036 | LOC_Os04g03860 | Os04g0127800 | - | Detail |
| C2H4g14708 | 4:1,496,123-1,497,565 | - | C1H4g08241 | CX4g035637 | LOC_Os04g03870 | Os04g0128001 | - | Detail |
| C2H4g01449 | 4:1,499,240-1,507,106 | - | C1H4g11586 | CX4g035637 | LOC_Os04g03890 | Os04g0128400 | - | Detail |
| C2H4g14740 | 4:1,529,160-1,530,861 | - | C1H4g01242 | CX4g036229 | LOC_Os04g03980 | Os04g0128900 | YUCCA7, OsYUCCA7, OsYUC7 | Detail |
| C2H4g09313 | 4:1,552,043-1,554,356 | - | C1H4g04144 | CX4g036394 | LOC_Os04g03990 | Os04g0129200 | - | Detail |
| C2H4g25033 | 4:1,557,921-1,563,251 | + | C1H4g23327 | CX4g034812 | LOC_Os04g04000 | Os04g0129300 | - | Detail |
| C2H4g07417 | 4:1,571,571-1,580,208 | + | C1H4g01243 | CX4g031894 | LOC_Os04g04020 | Os04g0129500 | - | Detail |
| C2H4g13802 | 4:1,581,308-1,584,624 | + | C1H4g02839 | CX4g031547 | LOC_Os04g04030 | Os04g0129600 | - | Detail |
| C2H4g01852 | 4:1,674,498-1,686,790 | - | C1H4g25848 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C2H4g06971 | 4:1,690,498-1,693,826 | - | C1H4g18623 | CX4g034087 | LOC_Os04g04254 | Os04g0131900 | CTB2 | Detail |
| C2H4g08446 | 4:1,703,518-1,709,686 | + | C1H4g04462 | CX4g033436 | LOC_Os04g04320 | Os04g0132300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |