| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g29556 | 1:20,743,795-20,767,898 | + | C2H1g25414 | CX1g003687 | LOC_Os01g40990 | Os01g0593000 | - | Detail |
| C1H1g06508 | 1:20,768,797-20,769,110 | - | C2H1g19698 | CX1g001975 | LOC_Os01g41000 | Os01g0593100 | - | Detail |
| C1H1g00280 | 1:20,769,138-20,769,446 | - | C2H1g01091 | CX1g001975 | LOC_Os01g41000 | Os01g0593100 | - | Detail |
| C1H1g24663 | 1:20,779,564-20,781,001 | + | C2H1g26660 | CX1g001665 | LOC_Os01g41010 | Os01g0593200 | OsFLZ2 | Detail |
| C1H1g03158 | 1:20,790,010-20,792,594 | - | C2H1g01729 | CX1g004416 | LOC_Os01g41030 | Os01g0593500 | - | Detail |
| C1H1g00408 | 1:20,794,714-20,798,963 | + | C2H1g24057 | CX1g000381 | LOC_Os01g41040 | Os01g0593600 | - | Detail |
| C1H1g30494 | 1:20,802,856-20,805,826 | + | C2H1g09012 | CX1g001186 | LOC_Os01g41050 | Os01g0593700 | - | Detail |
| C1H1g21011 | 1:20,821,342-20,823,045 | + | C2H1g27683 | CX1g002572 | LOC_Os01g41120 | Os01g0594300 | - | Detail |
| C1H1g11707 | 1:20,826,533-20,827,132 | - | C2H1g09622 | CX1g005324 | LOC_Os01g41140 | Os01g0594500 | - | Detail |
| C1H1g08414 | 1:20,834,394-20,834,943 | + | C2H1g25093 | - | - | Os01g0594650 | - | Detail |
| C1H1g05215 | 1:20,837,761-20,840,023 | - | C2H1g01408 | CX1g000117 | LOC_Os11g10490 | Os01g0807000 | - | Detail |
| C1H1g21953 | 1:20,866,573-20,867,770 | - | C2H1g06797 | CX1g000989 | LOC_Os01g41160 | Os01g0594800 | - | Detail |
| C1H1g13912 | 1:20,872,783-20,873,762 | - | C2H1g12627 | CX1g000945 | LOC_Os01g41170 | Os01g0594900 | - | Detail |
| C1H1g21945 | 1:20,881,259-20,887,924 | + | C2H1g12390 | CX1g000070 | LOC_Os01g41190 | Os01g0595100 | - | Detail |
| C1H1g29329 | 1:20,889,848-20,890,499 | + | C2H1g04960 | CX1g002506 | LOC_Os01g41200 | Os01g0595201 | - | Detail |
| C1H1g29839 | 1:20,896,800-20,897,279 | + | C2H1g30431 | CX1g006784 | LOC_Os01g41220 | Os01g0595400 | - | Detail |
| C1H1g21495 | 1:20,907,147-20,908,978 | + | C2H1g07569 | CX1g003431 | LOC_Os01g41240 | Os01g0595600 | - | Detail |
| C1H1g21074 | 1:20,910,776-20,912,343 | + | C2H1g01959 | CX1g004325 | LOC_Os01g41250 | Os01g0595700 | OsRALyase1 | Detail |
| C1H1g18710 | 1:20,914,811-20,917,942 | + | C2H1g20361 | CX1g000177 | LOC_Os01g41260 | Os01g0595800 | - | Detail |
| C1H1g23965 | 1:20,918,550-20,920,422 | + | C2H1g04509 | CX1g000177 | LOC_Os01g41270 | Os01g0595900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |