| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07438 | 1:33,787,088-33,790,949 | - | C2H1g05749 | CX1g005380 | LOC_Os01g65680 | Os01g0878800 | - | Detail |
| C1H1g15520 | 1:33,794,851-33,795,372 | - | C2H1g05749 | CX1g005380 | LOC_Os01g65680 | Os01g0878900 | - | Detail |
| C1H1g20719 | 1:33,798,650-33,799,237 | + | - | CX1g003006 | LOC_Os01g65700 | Os01g0879200 | - | Detail |
| C1H1g25090 | 1:33,800,575-33,801,252 | + | - | CX1g003321 | LOC_Os01g65710 | Os01g0879300 | - | Detail |
| C1H1g02620 | 1:33,803,260-33,806,281 | + | C2H1g27566 | CX1g006723 | LOC_Os01g65720 | Os01g0879400 | - | Detail |
| C1H1g27446 | 1:33,806,636-33,809,251 | - | C2H1g14458 | CX1g001626 | LOC_Os01g65730 | Os01g0879500 | - | Detail |
| C1H1g18600 | 1:33,813,333-33,815,393 | + | C2H1g09705 | CX1g006046 | LOC_Os01g65740 | Os01g0879600 | - | Detail |
| C1H1g25092 | 1:33,836,927-33,842,303 | + | C2H1g22339 | CX1g002139 | LOC_Os01g65780 | Os01g0880200 | - | Detail |
| C1H1g20354 | 1:33,846,959-33,850,450 | - | C2H1g26105 | CX1g002644 | LOC_Os01g65790 | Os01g0880300 | - | Detail |
| C1H1g04264 | 1:33,851,724-33,856,464 | - | C2H1g17822 | CX1g004875 | LOC_Os01g65800 | Os01g0880400 | - | Detail |
| C1H1g01792 | 1:33,862,201-33,863,439 | + | C2H1g29982 | CX1g003781 | LOC_Os01g65830 | Os01g0880800 | - | Detail |
| C1H1g17934 | 1:33,864,502-33,866,148 | - | C2H1g06200 | CX1g001321 | LOC_Os01g65840 | Os01g0880900 | - | Detail |
| C1H1g23013 | 1:33,866,601-33,875,049 | - | C2H1g11118 | CX1g006572 | LOC_Os01g65850 | Os01g0881000 | - | Detail |
| C1H1g25389 | 1:33,876,597-33,878,150 | - | C2H1g12436 | CX1g004581 | LOC_Os01g65860 | Os01g0881100 | - | Detail |
| C1H1g04016 | 1:33,893,484-33,898,163 | + | C2H1g12086 | CX1g005363 | LOC_Os01g65880 | Os01g0881300 | - | Detail |
| C1H1g23337 | 1:33,898,423-33,902,038 | + | C2H1g15181 | CX1g003286 | LOC_Os01g65890 | Os01g0881400 | - | Detail |
| C1H1g30922 | 1:33,902,590-33,906,198 | - | C2H1g03014 | CX1g002063 | LOC_Os01g65900 | Os01g0881500 | - | Detail |
| C1H1g06237 | 1:33,910,334-33,912,972 | - | C2H1g06093 | CX1g004823 | LOC_Os01g65920 | Os01g0881900 | - | Detail |
| C1H1g06784 | 1:33,917,751-33,921,744 | - | C2H1g20602 | CX1g005629 | LOC_Os01g65940 | Os01g0881966 | - | Detail |
| C1H1g26227 | 1:33,922,996-33,923,995 | + | C2H1g18577 | CX1g002714 | LOC_Os01g65950 | Os01g0882100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |