| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H8g11050 | 8:5,056,294-5,059,489 | + | C2H8g10424 | CX8g052246 | - | - | - | Detail |
| C1H8g23352 | 8:5,066,272-5,071,927 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10250 | Os08g0203400 | - | Detail |
| C1H8g12258 | 8:5,074,001-5,074,589 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10150 | Os08g0201700 | - | Detail |
| C1H8g26659 | 8:5,086,645-5,103,021 | - | C2H8g24374 | CX8g051622 | LOC_Os08g10290 | Os08g0203400 | - | Detail |
| C1H8g03659 | 8:5,143,615-5,146,238 | + | C2H8g21637 | CX8g051846 | LOC_Os08g10150 | Os08g0203400 | - | Detail |
| C1H8g04323 | 8:5,153,763-5,155,319 | + | C2H8g18431 | CX8g051622 | LOC_Os08g10290 | Os08g0203300 | - | Detail |
| C1H8g00219 | 8:5,155,392-5,161,389 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10290 | Os08g0203201 | - | Detail |
| C1H8g25219 | 8:5,166,511-5,173,737 | + | C2H8g27160 | CX8g052512 | LOC_Os08g10300 | Os08g0203300 | - | Detail |
| C1H8g01055 | 8:5,184,396-5,191,299 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10310 | Os08g0203400 | - | Detail |
| C1H8g08938 | 8:5,200,316-5,207,044 | + | C2H8g20847 | CX8g052512 | LOC_Os08g10320 | Os08g0203600 | - | Detail |
| C1H8g17499 | 8:5,208,897-5,216,696 | + | C2H8g24374 | CX8g052512 | LOC_Os08g10330 | Os08g0203700 | - | Detail |
| C1H8g15423 | 8:5,219,860-5,221,266 | + | C2H8g13356 | CX8g052422 | LOC_Os08g10340 | Os08g0203800 | - | Detail |
| C1H8g07848 | 8:5,227,137-5,228,165 | - | C2H8g08736 | CX8g050435 | LOC_Os08g10350 | Os08g0203900 | - | Detail |
| C1H8g16239 | 8:5,231,749-5,232,759 | - | - | CX5g037020 | - | - | - | Detail |
| C1H8g07810 | 8:5,254,862-5,257,895 | - | C2H8g27868 | CX8g051557 | LOC_Os08g10410 | Os08g0204800 | - | Detail |
| C1H8g04519 | 8:5,265,993-5,270,130 | + | C2H4g00337 | CX8g054379 | - | Os08g0367300 | - | Detail |
| C1H8g06266 | 8:5,272,617-5,274,391 | - | C2H8g28097 | CX8g053258 | LOC_Os08g10420 | Os08g0205000 | - | Detail |
| C1H8g11728 | 8:5,278,094-5,281,447 | + | C2H8g28943 | CX8g054174 | LOC_Os08g10440 | Os08g0205150 | OsPi304 | Detail |
| C1H8g02014 | 8:5,288,241-5,290,353 | + | C2H8g28943 | CX8g054503 | LOC_Os08g10440 | Os08g0205150 | OsPi304 | Detail |
| C1H8g17065 | 8:5,290,833-5,292,292 | - | - | - | - | Os08g0205125 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033364 | 4:26,699,948-26,702,135 | + | C1H4g09621 | C2H4g02940 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| CX4g033138 | 4:26,703,950-26,705,740 | + | C1H4g18002 | C2H4g14823 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| CX4g031526 | 4:26,708,160-26,712,055 | + | C1H4g00068 | C2H4g28997 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| CX4g034437 | 4:26,716,067-26,716,595 | + | - | - | - | - | - | Detail |
| CX4g032716 | 4:26,717,665-26,717,873 | + | - | - | - | - | - | Detail |
| CX4g035904 | 4:26,720,710-26,726,012 | + | C1H4g02712 | C2H4g17218 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| CX4g035957 | 4:26,736,508-26,743,964 | + | C1H4g17515 | C2H4g10708 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| CX4g036000 | 4:26,752,770-26,754,329 | - | C1H1g22605 | C2H8g05136 | - | - | - | Detail |
| CX4g036351 | 4:26,758,911-26,761,947 | + | C1H4g20369 | C2H4g23243 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| CX4g034949 | 4:26,763,512-26,767,232 | + | C1H4g29702 | C2H4g24013 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| CX4g031653 | 4:26,771,799-26,774,065 | + | C1H4g16195 | C2H4g11553 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| CX4g031949 | 4:26,775,562-26,776,685 | + | C1H4g22078 | C2H4g12331 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| CX4g034272 | 4:26,784,519-26,784,745 | + | - | - | - | - | - | Detail |
| CX4g034962 | 4:26,788,583-26,792,700 | + | C1H4g15848 | C2H4g15420 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| CX4g031812 | 4:26,794,226-26,799,217 | + | C1H4g23171 | C2H4g00576 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| CX4g035991 | 4:26,799,955-26,803,812 | - | C1H4g27864 | C2H4g30305 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| CX4g032086 | 4:26,805,533-26,807,936 | - | C1H4g17112 | C2H4g08342 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| CX4g034073 | 4:26,809,836-26,811,883 | - | C1H4g26505 | C2H4g00410 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| CX4g034207 | 4:26,867,297-26,867,470 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033769 | 4:26,875,650-26,876,042 | - | - | C2H4g03706 | LOC_Os04g52670 | Os04g0617050 | - | Detail |