| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01619 | 3:3,425,570-3,428,849 | - | C1H3g05067 | CX3g030931 | LOC_Os03g07880 | Os03g0174900 | OsNF-YA1, HAP2C | Detail |
| C2H3g14257 | 3:3,437,994-3,438,986 | + | C1H3g04156 | CX3g031308 | LOC_Os03g07890 | Os03g0175200 | - | Detail |
| C2H3g21508 | 3:3,444,728-3,445,051 | + | C1H3g18648 | CX3g030291 | - | - | - | Detail |
| C2H3g07896 | 3:3,445,637-3,449,942 | + | C1H3g26233 | CX3g025046 | LOC_Os03g07910 | Os03g0175600 | - | Detail |
| C2H3g28877 | 3:3,458,697-3,459,635 | - | C1H3g08447 | CX3g027383 | LOC_Os03g07920 | Os03g0175800 | BG1 | Detail |
| C2H3g25222 | 3:3,464,246-3,472,300 | + | C1H3g27866 | CX3g031114 | LOC_Os03g07930 | Os03g0176100 | - | Detail |
| C2H3g11134 | 3:3,474,218-3,475,224 | - | C1H3g15288 | CX3g025943 | LOC_Os03g07940 | Os03g0232200 | - | Detail |
| C2H3g07082 | 3:3,475,333-3,478,034 | - | C1H3g31714 | CX3g025943 | LOC_Os03g19900 | Os03g0176300 | - | Detail |
| C2H3g25173 | 3:3,482,592-3,482,873 | + | - | CX3g029598 | LOC_Os03g07950 | Os03g0176500 | - | Detail |
| C2H3g21895 | 3:3,486,636-3,489,102 | - | C1H3g15283 | CX3g030266 | LOC_Os03g07960 | Os03g0176700 | - | Detail |
| C2H3g00013 | 3:3,490,597-3,494,393 | - | C1H3g23456 | CX3g029368 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| C2H3g04928 | 3:3,496,047-3,496,367 | - | C1H3g29339 | CX3g028066 | LOC_Os03g07980 | Os03g0176900 | - | Detail |
| C2H3g13522 | 3:3,499,952-3,503,260 | + | C1H3g11831 | CX3g029737 | LOC_Os03g07990 | Os03g0177000 | - | Detail |
| C2H3g03958 | 3:3,504,263-3,508,131 | + | C1H3g26527 | CX3g030435 | LOC_Os03g08000 | Os03g0177300 | - | Detail |
| C2H3g29734 | 3:3,508,804-3,511,802 | + | C1H3g16670 | CX3g025284 | LOC_Os03g08020 | Os03g0177500 | OsEF1A | Detail |
| C2H3g01446 | 3:3,514,961-3,517,138 | + | C1H3g02996 | CX3g026443 | LOC_Os03g08050 | Os03g0178000 | - | Detail |
| C2H3g10879 | 3:3,524,904-3,528,224 | + | C1H3g00802 | CX3g028070 | LOC_Os03g08020 | Os03g0178000 | - | Detail |
| C2H3g13691 | 3:3,531,614-3,534,557 | + | C1H3g02996 | CX3g025284 | LOC_Os03g08050 | Os03g0177500 | OsEF1A | Detail |
| C2H3g00449 | 3:3,534,635-3,541,746 | - | C1H3g20350 | CX3g028367 | LOC_Os03g08070 | Os03g0178100 | - | Detail |
| C2H3g25180 | 3:3,544,766-3,546,539 | + | C1H3g15649 | CX3g027428 | LOC_Os03g08080 | Os03g0178200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036475 | 4:26,557,684-26,559,082 | + | C1H4g10872 | C2H4g08391 | LOC_Os04g52180 | Os04g0611300 | - | Detail |
| CX4g034440 | 4:26,560,942-26,564,166 | + | C1H4g27242 | C2H4g02094 | LOC_Os04g52190 | Os04g0611400 | OsVSR7 | Detail |
| CX4g034242 | 4:26,564,781-26,572,056 | - | C1H4g09397 | C2H4g06949 | LOC_Os04g52200 | Os04g0611500 | - | Detail |
| CX4g033691 | 4:26,575,156-26,579,561 | + | C1H4g09771 | C2H4g00671 | LOC_Os04g52230 | Os04g0611800 | OsKSL2 | Detail |
| CX4g032176 | 4:26,600,330-26,606,139 | + | C1H4g22925 | C2H4g15117 | LOC_Os04g52240 | Os04g0612000 | KS2, OsKS2, KS2, KSL2, OsKSL2, OsTPS27, OsKSL5 | Detail |
| CX4g035138 | 4:26,607,617-26,608,845 | - | C1H4g18596 | C2H4g26250 | - | Os04g0612100 | - | Detail |
| CX4g031769 | 4:26,622,600-26,623,067 | + | C1H4g29756 | C2H4g23617 | LOC_Os04g52260 | Os04g0612500 | OsHyPRP16 | Detail |
| CX4g032492 | 4:26,624,851-26,629,555 | - | C1H4g23379 | C2H4g26765 | LOC_Os04g52270 | Os04g0612600 | - | Detail |
| CX4g036512 | 4:26,630,485-26,635,038 | + | C1H4g22616 | C2H4g08408 | LOC_Os04g52280 | Os04g0612700 | FC1, OsCAD7 | Detail |
| CX4g033473 | 4:26,635,427-26,637,781 | - | C1H4g13487 | C2H4g11392 | LOC_Os04g52290 | Os04g0612800 | - | Detail |
| CX4g035500 | 4:26,638,656-26,639,078 | + | C1H4g23018 | C2H4g06866 | LOC_Os04g52300 | Os04g0612900 | - | Detail |
| CX4g036361 | 4:26,639,840-26,641,798 | - | C1H4g19703 | C2H4g30388 | LOC_Os04g52310 | Os04g0613000 | ZIP3, OsZIP3 | Detail |
| CX4g032554 | 4:26,649,595-26,652,543 | + | C1H4g25868 | C2H4g14538 | LOC_Os04g52320 | Os04g0613200 | - | Detail |
| CX4g033530 | 4:26,656,123-26,657,575 | - | C1H4g13224 | C2H4g16426 | LOC_Os04g52330 | Os04g0613300 | - | Detail |
| CX4g033988 | 4:26,659,181-26,663,382 | - | C1H4g01801 | C2H4g12813 | LOC_Os04g52340 | Os04g0613400 | - | Detail |
| CX4g031886 | 4:26,664,432-26,665,728 | + | C1H4g11906 | C2H4g02435 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| CX4g035778 | 4:26,666,766-26,668,400 | + | C1H4g11906 | C2H4g02435 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| CX4g033920 | 4:26,669,820-26,673,674 | - | C1H4g03528 | C2H4g14262 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| CX4g033615 | 4:26,680,112-26,684,171 | - | C1H4g12683 | C2H4g30596 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| CX4g032046 | 4:26,689,150-26,693,168 | - | C1H4g15444 | C2H4g10814 | LOC_Os04g52390 | Os04g0613900 | - | Detail |