| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035673 | 4:26,091,668-26,098,574 | - | C1H4g07013 | C2H4g18022 | LOC_Os04g51370 | Os04g0602800 | - | Detail |
| CX4g032953 | 4:26,102,734-26,105,027 | + | C1H4g01625 | C2H4g12178 | LOC_Os04g51380 | Os04g0602900 | - | Detail |
| CX4g032309 | 4:26,107,538-26,112,174 | + | C1H4g07453 | C2H4g08213 | LOC_Os04g51390 | Os04g0603000 | - | Detail |
| CX4g034838 | 4:26,113,586-26,113,918 | + | - | - | - | Os04g0603100 | - | Detail |
| CX4g034116 | 4:26,114,532-26,115,837 | - | C1H4g14243 | C2H4g28575 | LOC_Os04g51400 | Os04g0603200 | - | Detail |
| CX4g032990 | 4:26,117,487-26,117,945 | + | - | - | LOC_Os04g51404 | Os04g0603300 | - | Detail |
| CX4g034381 | 4:26,121,982-26,126,414 | - | C1H4g00398 | C2H4g22751 | LOC_Os04g51410 | Os04g0603400 | - | Detail |
| CX4g036328 | 4:26,130,488-26,136,676 | - | C1H4g14737 | C2H4g02111 | LOC_Os04g51440 | Os04g0604000 | - | Detail |
| CX4g036245 | 4:26,138,725-26,139,837 | - | C1H4g13991 | C2H4g06472 | LOC_Os04g51450 | Os04g0604200 | - | Detail |
| CX4g033349 | 4:26,149,762-26,150,817 | - | C1H4g04898 | C2H4g08423 | LOC_Os04g51460 | Os04g0604300 | - | Detail |
| CX4g035835 | 4:26,153,640-26,154,209 | + | - | C2H4g12034 | LOC_Os03g63880 | Os12g0539800 | - | Detail |
| CX4g033941 | 4:26,155,196-26,166,576 | - | C1H4g18428 | C2H4g00401 | LOC_Os01g44020 | Os12g0539700 | - | Detail |
| CX4g035594 | 4:26,169,693-26,170,884 | + | C1H4g08994 | C2H4g05605 | LOC_Os04g51510 | Os04g0604800 | - | Detail |
| CX4g035034 | 4:26,171,327-26,174,071 | - | C1H4g02562 | C2H4g08080 | LOC_Os04g51520 | Os04g0604900 | - | Detail |
| CX4g031874 | 4:26,186,323-26,187,559 | + | C1H4g24671 | C2H4g16240 | LOC_Os04g51560 | Os04g0605100 | - | Detail |
| CX4g031726 | 4:26,193,302-26,194,112 | + | C1H4g04903 | C2H4g16496 | LOC_Os04g51570 | Os04g0605200 | - | Detail |
| CX4g031756 | 4:26,195,537-26,200,029 | - | C1H4g26879 | C2H4g17480 | LOC_Os04g51580 | Os04g0605300 | - | Detail |
| CX4g033983 | 4:26,208,779-26,220,462 | - | C1H4g23236 | C2H4g19075 | LOC_Os04g51610 | Os04g0605500 | - | Detail |
| CX4g035134 | 4:26,228,474-26,228,731 | - | - | - | - | - | - | Detail |
| CX4g032768 | 4:26,234,039-26,235,976 | + | C1H4g26899 | C2H4g03623 | LOC_Os04g51630 | Os04g0605900 | - | Detail |