| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03976 | 4:21,775,289-21,779,092 | + | C1H4g02468 | CX4g033880 | LOC_Os04g42570 | Os04g0504500 | - | Detail |
| C2H4g26755 | 4:21,780,931-21,784,591 | + | C1H4g08801 | CX4g034844 | LOC_Os04g42580 | Os04g0504600 | - | Detail |
| C2H4g20270 | 4:21,784,803-21,786,527 | - | C1H4g08459 | CX4g035367 | LOC_Os04g42590 | Os04g0504700 | - | Detail |
| C2H4g27949 | 4:21,787,811-21,794,217 | - | C1H4g18953 | CX4g034283 | LOC_Os04g42600 | Os04g0504800 | - | Detail |
| C2H4g13700 | 4:21,799,043-21,804,087 | + | C1H4g09949 | CX4g035894 | LOC_Os04g42610 | Os04g0505000 | - | Detail |
| C2H4g25893 | 4:21,808,733-21,810,094 | + | C1H4g26420 | CX4g033549 | LOC_Os04g42620 | Os04g0505200 | - | Detail |
| C2H4g26509 | 4:21,823,378-21,825,051 | - | - | CX4g036118 | LOC_Os04g42650 | Os04g0505400 | - | Detail |
| C2H4g26448 | 4:21,845,112-21,846,788 | - | C1H4g22256 | CX4g036362 | LOC_Os04g42670 | Os04g0505700 | - | Detail |
| C2H4g18722 | 4:21,853,620-21,855,080 | - | C1H4g20808 | CX4g034590 | LOC_Os04g42690 | Os04g0506000 | - | Detail |
| C2H4g22704 | 4:21,856,222-21,860,943 | - | C1H4g29579 | CX4g031779 | LOC_Os04g42700 | Os04g0506100 | - | Detail |
| C2H4g25253 | 4:21,875,815-21,879,797 | - | C1H4g02105 | CX4g035900 | LOC_Os04g42720 | Os04g0506300 | - | Detail |
| C2H4g08397 | 4:21,882,101-21,884,533 | + | C1H4g26221 | CX4g033680 | LOC_Os04g42740 | Os04g0506700 | SDRLK-29 | Detail |
| C2H4g07244 | 4:21,887,494-21,888,678 | + | - | - | LOC_Os04g42760 | Os04g0506800 | OsSTLP3 | Detail |
| C2H4g24051 | 4:21,899,801-21,905,681 | - | C1H4g22828 | CX4g032341 | LOC_Os04g42770 | Os04g0506900 | - | Detail |
| C2H4g08751 | 4:21,908,962-21,922,319 | - | C1H4g00682 | CX4g032669 | LOC_Os04g42784 | Os04g0507000 | - | Detail |
| C2H4g06679 | 4:21,923,349-21,924,878 | - | C1H4g13723 | CX4g035355 | LOC_Os04g42800 | - | - | Detail |
| C2H4g07568 | 4:21,926,839-21,928,280 | - | C1H4g11839 | CX4g032324 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g22062 | 4:21,930,335-21,932,110 | - | C1H4g04437 | CX4g036634 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C2H4g14077 | 4:21,933,409-21,944,824 | - | C1H4g00145 | CX4g034196 | LOC_Os04g42840 | Os04g0507500 | - | Detail |
| C2H4g29137 | 4:21,947,969-21,948,358 | - | C1H4g01460 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035744 | 4:25,988,146-25,992,706 | + | C1H4g01630 | C2H4g05473 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| CX4g035030 | 4:25,995,656-25,997,411 | + | C1H4g04836 | C2H4g10442 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| CX4g035889 | 4:25,998,240-25,999,503 | - | C1H4g15893 | C2H4g25284 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| CX4g035681 | 4:26,000,342-26,002,167 | - | C1H4g02523 | C2H4g12319 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| CX4g036218 | 4:26,004,737-26,005,942 | - | C1H4g06092 | C2H4g13155 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| CX4g036257 | 4:26,007,793-26,010,078 | - | C1H4g28733 | C2H4g11382 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| CX4g033183 | 4:26,010,937-26,016,103 | - | C1H4g04973 | C2H4g16073 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| CX4g033914 | 4:26,021,907-26,022,056 | + | - | - | - | - | - | Detail |
| CX4g032625 | 4:26,024,675-26,028,676 | - | C1H4g07853 | C2H4g00138 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| CX4g033956 | 4:26,030,623-26,034,197 | - | C1H4g08504 | C2H4g09942 | LOC_Os04g51190 | Os04g0600900 | GRF3, OsGRF3 | Detail |
| CX4g032272 | 4:26,047,237-26,048,605 | - | C1H4g18677 | C2H4g25560 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| CX4g033025 | 4:26,050,069-26,051,430 | - | C1H4g11359 | C2H4g10254 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| CX4g034624 | 4:26,051,601-26,055,751 | + | C1H4g26178 | C2H4g14874 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| CX4g036413 | 4:26,056,405-26,057,259 | - | C1H4g02715 | C2H4g01351 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| CX4g033882 | 4:26,064,511-26,066,765 | - | C1H4g26391 | C2H4g21768 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| CX4g033318 | 4:26,068,349-26,070,616 | - | C1H4g19881 | C2H4g22043 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| CX4g034293 | 4:26,072,949-26,076,349 | - | C1H4g05144 | C2H4g12426 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| CX4g033998 | 4:26,079,939-26,083,141 | + | C1H4g22875 | C2H4g05437 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| CX4g032956 | 4:26,084,872-26,087,283 | + | C1H4g12838 | C2H4g15861 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| CX4g034077 | 4:26,088,029-26,090,337 | - | C1H4g06807 | C2H4g20183 | LOC_Os04g51360 | Os04g0602700 | - | Detail |