| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g28456 | 1:17,769,166-17,771,950 | - | C1H1g29511 | CX1g000818 | LOC_Os01g34660 | Os01g0531000 | - | Detail |
| C2H1g17879 | 1:17,776,554-17,780,726 | + | C1H1g12081 | CX1g003349 | LOC_Os01g34700 | Os01g0531500 | - | Detail |
| C2H1g21275 | 1:17,792,645-17,806,558 | - | C1H1g13242 | CX1g005955 | LOC_Os01g34780 | Os01g0532200 | - | Detail |
| C2H1g04710 | 1:17,864,868-17,871,503 | + | C1H1g30653 | CX1g001883 | LOC_Os01g34870 | Os01g0532800 | - | Detail |
| C2H1g21809 | 1:17,872,691-17,896,461 | - | C1H1g08964 | CX1g006242 | LOC_Os01g34880 | Os01g0533000 | - | Detail |
| C2H1g24525 | 1:17,899,053-17,899,586 | + | C1H1g25379 | - | - | - | - | Detail |
| C2H1g25242 | 1:17,907,985-17,914,422 | - | C1H1g05992 | CX1g002208 | LOC_Os01g34920 | Os01g0533400 | - | Detail |
| C2H1g25591 | 1:17,914,876-17,915,241 | - | C1H1g02738 | - | - | Os01g0533450 | - | Detail |
| C2H1g15042 | 1:17,915,558-17,931,505 | - | C1H1g28507 | CX1g003265 | LOC_Os01g34930 | Os01g0533500 | - | Detail |
| C2H1g10622 | 1:17,932,650-17,934,658 | - | C1H1g04274 | CX1g003265 | LOC_Os01g34900 | Os01g0533800 | - | Detail |
| C2H1g11465 | 1:17,951,834-17,952,840 | - | - | - | LOC_Os01g34940 | - | - | Detail |
| C2H1g12481 | 1:17,971,157-17,979,656 | + | C1H1g10355 | CX1g004495 | LOC_Os01g34970 | Os01g0533900 | - | Detail |
| C2H1g08129 | 1:18,013,502-18,023,974 | + | C1H1g30493 | CX1g001922 | LOC_Os01g35030 | Os01g0534700 | - | Detail |
| C2H1g15432 | 1:18,027,007-18,030,026 | + | C1H1g11430 | CX1g001748 | LOC_Os01g35040 | Os01g0534800 | - | Detail |
| C2H1g00212 | 1:18,033,454-18,044,269 | - | C1H1g16135 | CX1g003702 | LOC_Os01g35050 | Os01g0534900 | OsOSCA1.1 | Detail |
| C2H1g10503 | 1:18,062,017-18,066,373 | - | C1H1g28775 | CX1g000084 | LOC_Os01g35160 | Os01g0535400 | - | Detail |
| C2H1g18892 | 1:18,072,244-18,075,022 | + | C1H1g17125 | CX1g002557 | LOC_Os01g35170 | Os01g0535900 | - | Detail |
| C2H1g09957 | 1:18,075,835-18,081,903 | - | C1H1g28835 | CX1g005646 | LOC_Os01g35184 | Os01g0536000 | - | Detail |
| C2H1g02620 | 1:18,084,967-18,088,814 | - | C1H1g05453 | CX1g003966 | LOC_Os01g35230 | Os01g0536400 | - | Detail |
| C2H1g12032 | 1:18,091,784-18,092,656 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035744 | 4:25,988,146-25,992,706 | + | C1H4g01630 | C2H4g05473 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| CX4g035030 | 4:25,995,656-25,997,411 | + | C1H4g04836 | C2H4g10442 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| CX4g035889 | 4:25,998,240-25,999,503 | - | C1H4g15893 | C2H4g25284 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| CX4g035681 | 4:26,000,342-26,002,167 | - | C1H4g02523 | C2H4g12319 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| CX4g036218 | 4:26,004,737-26,005,942 | - | C1H4g06092 | C2H4g13155 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| CX4g036257 | 4:26,007,793-26,010,078 | - | C1H4g28733 | C2H4g11382 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| CX4g033183 | 4:26,010,937-26,016,103 | - | C1H4g04973 | C2H4g16073 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| CX4g033914 | 4:26,021,907-26,022,056 | + | - | - | - | - | - | Detail |
| CX4g032625 | 4:26,024,675-26,028,676 | - | C1H4g07853 | C2H4g00138 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| CX4g033956 | 4:26,030,623-26,034,197 | - | C1H4g08504 | C2H4g09942 | LOC_Os04g51190 | Os04g0600900 | GRF3, OsGRF3 | Detail |
| CX4g032272 | 4:26,047,237-26,048,605 | - | C1H4g18677 | C2H4g25560 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| CX4g033025 | 4:26,050,069-26,051,430 | - | C1H4g11359 | C2H4g10254 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| CX4g034624 | 4:26,051,601-26,055,751 | + | C1H4g26178 | C2H4g14874 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| CX4g036413 | 4:26,056,405-26,057,259 | - | C1H4g02715 | C2H4g01351 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| CX4g033882 | 4:26,064,511-26,066,765 | - | C1H4g26391 | C2H4g21768 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| CX4g033318 | 4:26,068,349-26,070,616 | - | C1H4g19881 | C2H4g22043 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| CX4g034293 | 4:26,072,949-26,076,349 | - | C1H4g05144 | C2H4g12426 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| CX4g033998 | 4:26,079,939-26,083,141 | + | C1H4g22875 | C2H4g05437 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| CX4g032956 | 4:26,084,872-26,087,283 | + | C1H4g12838 | C2H4g15861 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| CX4g034077 | 4:26,088,029-26,090,337 | - | C1H4g06807 | C2H4g20183 | LOC_Os04g51360 | Os04g0602700 | - | Detail |