| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g24831 | 5:22,965,867-22,966,685 | + | C2H5g26586 | CX5g036692 | LOC_Os05g48900 | Os05g0563600 | - | Detail |
| C1H5g28795 | 5:22,981,163-22,981,924 | + | C2H5g19965 | CX1g003489 | LOC_Os05g48930 | Os05g0149950 | - | Detail |
| C1H5g01891 | 5:22,986,406-22,990,077 | - | C2H5g30565 | CX5g038036 | LOC_Os05g48940 | Os05g0564000 | - | Detail |
| C1H5g27525 | 5:22,990,659-22,991,333 | + | C2H5g09559 | - | LOC_Os05g48950 | Os05g0564100 | - | Detail |
| C1H5g29642 | 5:22,998,567-22,999,472 | + | C2H5g04888 | CX5g040225 | LOC_Os05g48960 | Os05g0564200 | - | Detail |
| C1H5g01424 | 5:23,002,465-23,009,620 | + | C2H5g15150 | CX5g038798 | LOC_Os05g48970 | Os05g0564300 | - | Detail |
| C1H5g14301 | 5:23,010,037-23,011,783 | - | C2H5g21685 | CX5g039483 | LOC_Os05g48980 | Os05g0564400 | - | Detail |
| C1H5g26322 | 5:23,018,190-23,019,554 | + | C2H5g04875 | CX5g036954 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| C1H5g22531 | 5:23,021,822-23,023,267 | + | C2H5g04875 | CX5g036954 | LOC_Os05g48990 | Os05g0564500 | DWL2, OsWOX9D | Detail |
| C1H5g22284 | 5:23,025,779-23,026,913 | - | C2H5g03360 | CX5g040209 | LOC_Os05g49010 | Os05g0564700 | - | Detail |
| C1H5g11743 | 5:23,029,665-23,031,523 | + | C2H5g08970 | CX5g037646 | LOC_Os05g49020 | Os05g0564800 | - | Detail |
| C1H5g09043 | 5:23,032,027-23,034,181 | + | C2H5g20403 | CX5g037646 | LOC_Os05g49030 | Os05g0565000 | - | Detail |
| C1H5g09274 | 5:23,036,925-23,038,827 | + | C2H5g24526 | CX5g038379 | LOC_Os05g49040 | Os05g0565100 | - | Detail |
| C1H5g19442 | 5:23,039,052-23,041,716 | + | C2H5g06163 | CX5g040804 | LOC_Os05g49050 | Os05g0565200 | - | Detail |
| C1H5g17900 | 5:23,044,938-23,046,877 | - | C2H5g13806 | CX5g038249 | - | - | - | Detail |
| C1H5g08734 | 5:23,048,230-23,051,078 | - | C2H5g19958 | CX5g039855 | LOC_Os05g49060 | Os05g0565400 | - | Detail |
| C1H5g23266 | 5:23,051,535-23,052,473 | - | C2H5g07466 | CX5g040924 | LOC_Os05g49070 | Os05g0565500 | - | Detail |
| C1H5g16562 | 5:23,052,833-23,053,243 | - | C2H5g00600 | CX5g037715 | LOC_Os05g49080 | Os05g0565701 | - | Detail |
| C1H5g03208 | 5:23,070,151-23,073,110 | + | C2H5g29804 | CX5g039821 | LOC_Os05g49100 | Os05g0565900 | - | Detail |
| C1H5g11149 | 5:23,078,040-23,083,585 | + | C2H5g02921 | CX5g036693 | LOC_Os05g49120 | Os05g0566200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035744 | 4:25,988,146-25,992,706 | + | C1H4g01630 | C2H4g05473 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| CX4g035030 | 4:25,995,656-25,997,411 | + | C1H4g04836 | C2H4g10442 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| CX4g035889 | 4:25,998,240-25,999,503 | - | C1H4g15893 | C2H4g25284 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| CX4g035681 | 4:26,000,342-26,002,167 | - | C1H4g02523 | C2H4g12319 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| CX4g036218 | 4:26,004,737-26,005,942 | - | C1H4g06092 | C2H4g13155 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| CX4g036257 | 4:26,007,793-26,010,078 | - | C1H4g28733 | C2H4g11382 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| CX4g033183 | 4:26,010,937-26,016,103 | - | C1H4g04973 | C2H4g16073 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| CX4g033914 | 4:26,021,907-26,022,056 | + | - | - | - | - | - | Detail |
| CX4g032625 | 4:26,024,675-26,028,676 | - | C1H4g07853 | C2H4g00138 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| CX4g033956 | 4:26,030,623-26,034,197 | - | C1H4g08504 | C2H4g09942 | LOC_Os04g51190 | Os04g0600900 | GRF3, OsGRF3 | Detail |
| CX4g032272 | 4:26,047,237-26,048,605 | - | C1H4g18677 | C2H4g25560 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| CX4g033025 | 4:26,050,069-26,051,430 | - | C1H4g11359 | C2H4g10254 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| CX4g034624 | 4:26,051,601-26,055,751 | + | C1H4g26178 | C2H4g14874 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| CX4g036413 | 4:26,056,405-26,057,259 | - | C1H4g02715 | C2H4g01351 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| CX4g033882 | 4:26,064,511-26,066,765 | - | C1H4g26391 | C2H4g21768 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| CX4g033318 | 4:26,068,349-26,070,616 | - | C1H4g19881 | C2H4g22043 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| CX4g034293 | 4:26,072,949-26,076,349 | - | C1H4g05144 | C2H4g12426 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| CX4g033998 | 4:26,079,939-26,083,141 | + | C1H4g22875 | C2H4g05437 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| CX4g032956 | 4:26,084,872-26,087,283 | + | C1H4g12838 | C2H4g15861 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| CX4g034077 | 4:26,088,029-26,090,337 | - | C1H4g06807 | C2H4g20183 | LOC_Os04g51360 | Os04g0602700 | - | Detail |