| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g13031 | 12:17,091,689-17,092,712 | + | C2H12g21547 | CX12g018804 | LOC_Os12g33230 | Os12g0517100 | - | Detail |
| C1H12g09087 | 12:17,098,348-17,098,686 | + | C2H12g24039 | CX12g015986 | LOC_Os12g33240 | Os12g0517200 | - | Detail |
| C1H12g10574 | 12:17,101,194-17,103,928 | + | C2H12g22503 | CX12g017136 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C1H12g08829 | 12:17,153,641-17,156,701 | + | C2H12g23119 | CX12g017792 | LOC_Os12g33270 | Os12g0527500 | - | Detail |
| C1H12g23668 | 12:17,165,407-17,171,178 | + | C2H12g08279 | CX12g016074 | LOC_Os12g34320 | Os12g0527700 | SDRLK-10 | Detail |
| C1H12g10121 | 12:17,172,157-17,179,600 | - | C2H12g18063 | CX12g016434 | LOC_Os12g34330 | Os12g0527800 | - | Detail |
| C1H12g16370 | 12:17,180,149-17,181,784 | + | C2H12g27770 | CX12g017551 | LOC_Os12g34340 | Os12g0527900 | - | Detail |
| C1H12g27316 | 12:17,182,645-17,187,010 | - | C2H12g02414 | CX12g017098 | LOC_Os12g34350 | Os12g0528000 | - | Detail |
| C1H12g03418 | 12:17,193,401-17,195,866 | + | C2H12g08556 | CX12g018233 | LOC_Os12g34360 | Os12g0528100 | - | Detail |
| C1H12g05978 | 12:17,197,488-17,202,562 | + | C2H12g08360 | CX12g016339 | LOC_Os12g34370 | Os12g0528300 | - | Detail |
| C1H12g25982 | 12:17,202,952-17,207,744 | + | C2H12g11104 | CX12g017447 | LOC_Os12g34380 | Os12g0528400 | OsGS3 | Detail |
| C1H12g23950 | 12:17,208,790-17,211,299 | - | C2H12g22976 | CX12g017795 | - | Os12g0528801 | - | Detail |
| C1H12g08305 | 12:17,227,077-17,229,804 | + | C2H12g09991 | CX12g016328 | LOC_Os12g34440 | Os12g0529200 | - | Detail |
| C1H12g22186 | 12:17,233,871-17,235,027 | + | C2H12g16177 | CX12g016537 | LOC_Os12g34450 | Os12g0529300 | - | Detail |
| C1H12g26621 | 12:17,235,531-17,237,237 | + | C2H12g29871 | CX12g016869 | LOC_Os12g34450 | Os12g0529400 | - | Detail |
| C1H12g27262 | 12:17,249,641-17,251,170 | + | C2H12g25546 | CX12g015285 | LOC_Os12g34500 | Os12g0529900 | - | Detail |
| C1H12g02312 | 12:17,253,411-17,253,922 | - | C2H12g21736 | CX12g016676 | LOC_Os12g34510 | Os12g0530000 | - | Detail |
| C1H12g01928 | 12:17,255,017-17,261,670 | - | C2H12g27108 | CX12g015313 | LOC_Os12g34524 | Os12g0530100 | - | Detail |
| C1H12g06755 | 12:17,312,944-17,315,765 | + | C2H12g30263 | CX12g018073 | LOC_Os12g34840 | Os12g0533400 | - | Detail |
| C1H12g14770 | 12:17,316,132-17,322,373 | - | C2H12g18128 | CX12g018318 | LOC_Os12g34850 | Os12g0533500 | OsVIL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035744 | 4:25,988,146-25,992,706 | + | C1H4g01630 | C2H4g05473 | LOC_Os04g51120 | Os04g0599900 | - | Detail |
| CX4g035030 | 4:25,995,656-25,997,411 | + | C1H4g04836 | C2H4g10442 | LOC_Os04g51130 | Os04g0600000 | - | Detail |
| CX4g035889 | 4:25,998,240-25,999,503 | - | C1H4g15893 | C2H4g25284 | LOC_Os04g51140 | Os04g0600100 | - | Detail |
| CX4g035681 | 4:26,000,342-26,002,167 | - | C1H4g02523 | C2H4g12319 | LOC_Os04g51150 | Os04g0600200 | AOX1A, Ao1-1, AOX1a, OsAOX1a, AOX 1a | Detail |
| CX4g036218 | 4:26,004,737-26,005,942 | - | C1H4g06092 | C2H4g13155 | LOC_Os04g51160 | Os04g0600300 | AOX1B, AOX1b, OsAOX1b | Detail |
| CX4g036257 | 4:26,007,793-26,010,078 | - | C1H4g28733 | C2H4g11382 | LOC_Os04g51166 | Os04g0600400 | - | Detail |
| CX4g033183 | 4:26,010,937-26,016,103 | - | C1H4g04973 | C2H4g16073 | LOC_Os04g51172 | Os04g0600500 | OsBRXL3 | Detail |
| CX4g033914 | 4:26,021,907-26,022,056 | + | - | - | - | - | - | Detail |
| CX4g032625 | 4:26,024,675-26,028,676 | - | C1H4g07853 | C2H4g00138 | LOC_Os04g51180 | Os04g0600800 | COLD1 | Detail |
| CX4g033956 | 4:26,030,623-26,034,197 | - | C1H4g08504 | C2H4g09942 | LOC_Os04g51190 | Os04g0600900 | GRF3, OsGRF3 | Detail |
| CX4g032272 | 4:26,047,237-26,048,605 | - | C1H4g18677 | C2H4g25560 | LOC_Os04g51240 | Os04g0601400 | - | Detail |
| CX4g033025 | 4:26,050,069-26,051,430 | - | C1H4g11359 | C2H4g10254 | LOC_Os04g51250 | Os04g0601500 | - | Detail |
| CX4g034624 | 4:26,051,601-26,055,751 | + | C1H4g26178 | C2H4g14874 | LOC_Os04g51260 | Os04g0602000 | - | Detail |
| CX4g036413 | 4:26,056,405-26,057,259 | - | C1H4g02715 | C2H4g01351 | LOC_Os04g51270 | Os04g0601700 | - | Detail |
| CX4g033882 | 4:26,064,511-26,066,765 | - | C1H4g26391 | C2H4g21768 | LOC_Os04g51310 | Os04g0602200 | - | Detail |
| CX4g033318 | 4:26,068,349-26,070,616 | - | C1H4g19881 | C2H4g22043 | LOC_Os04g51320 | Os04g0602300 | - | Detail |
| CX4g034293 | 4:26,072,949-26,076,349 | - | C1H4g05144 | C2H4g12426 | LOC_Os04g51330 | Os04g0602400 | - | Detail |
| CX4g033998 | 4:26,079,939-26,083,141 | + | C1H4g22875 | C2H4g05437 | LOC_Os04g51340 | Os04g0602500 | - | Detail |
| CX4g032956 | 4:26,084,872-26,087,283 | + | C1H4g12838 | C2H4g15861 | LOC_Os04g51350 | Os04g0602600 | MPR25 | Detail |
| CX4g034077 | 4:26,088,029-26,090,337 | - | C1H4g06807 | C2H4g20183 | LOC_Os04g51360 | Os04g0602700 | - | Detail |