| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g02809 | 3:2,382,989-2,384,382 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g07135 | 3:2,384,709-2,385,099 | - | C1H3g28897 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C2H3g29786 | 3:2,389,090-2,391,982 | + | C1H3g27908 | CX3g029578 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| C2H3g29884 | 3:2,395,079-2,395,626 | + | C1H3g00677 | - | - | - | - | Detail |
| C2H3g01040 | 3:2,400,513-2,401,439 | - | C1H3g00185 | CX3g030199 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| C2H3g29045 | 3:2,408,018-2,408,917 | - | C1H3g00155 | CX3g028233 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| C2H3g13096 | 3:2,424,730-2,425,155 | + | C1H3g19498 | CX3g030128 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| C2H3g29028 | 3:2,427,358-2,428,983 | + | C1H3g28178 | CX3g030522 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| C2H3g30077 | 3:2,430,807-2,432,390 | - | C1H3g29432 | CX3g029750 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| C2H3g00543 | 3:2,434,580-2,435,837 | + | C1H3g22703 | - | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g05251 | 3:2,436,029-2,436,640 | + | C1H3g31371 | CX3g024968 | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C2H3g19570 | 3:2,444,751-2,445,075 | + | C1H3g21603 | - | - | Os03g0150700 | - | Detail |
| C2H3g28429 | 3:2,446,347-2,447,933 | - | C1H3g04203 | CX3g028575 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| C2H3g24713 | 3:2,452,468-2,457,529 | - | C1H3g13409 | CX3g030168 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| C2H3g23634 | 3:2,461,313-2,469,594 | + | C1H3g18077 | CX3g028756 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |
| C2H3g25123 | 3:2,469,992-2,470,303 | - | C1H3g12618 | CX3g027574 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| C2H3g19949 | 3:2,472,091-2,472,774 | - | C1H3g18071 | CX3g029524 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| C2H3g16820 | 3:2,473,799-2,479,561 | + | C1H3g05811 | CX3g027544 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| C2H3g19649 | 3:2,480,098-2,484,362 | - | C1H3g17815 | CX3g029565 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| C2H3g15451 | 3:2,485,113-2,488,078 | - | C1H3g06798 | CX3g027324 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033568 | 4:25,710,418-25,712,966 | + | C1H4g20135 | C2H4g02751 | LOC_Os04g50204 | Os04g0592400 | - | Detail |
| CX4g034823 | 4:25,715,040-25,717,184 | - | C1H4g07229 | C2H4g26050 | LOC_Os04g50208 | Os04g0592500 | - | Detail |
| CX4g036584 | 4:25,719,379-25,721,563 | - | C1H4g17911 | C2H4g14985 | LOC_Os04g50216 | Os04g0592600 | - | Detail |
| CX4g032082 | 4:25,725,749-25,731,748 | - | C1H4g26639 | C2H4g11940 | LOC_Os04g50660 | Os04g0592700 | - | Detail |
| CX4g035171 | 4:25,735,754-25,737,075 | - | C1H4g07059 | C2H4g11781 | LOC_Os04g50680 | Os04g0593200 | Os2R_MYB50 | Detail |
| CX4g033777 | 4:25,740,874-25,745,340 | + | C1H4g05924 | C2H4g15239 | LOC_Os04g50710 | Os04g0593500 | - | Detail |
| CX4g035875 | 4:25,753,859-25,760,233 | + | C1H4g31049 | C2H4g24933 | LOC_Os04g50730 | Os04g0593700 | - | Detail |
| CX4g036493 | 4:25,763,657-25,764,201 | - | - | - | LOC_Os04g50750 | - | - | Detail |
| CX4g032893 | 4:25,764,765-25,768,033 | - | C1H4g07130 | C2H4g15923 | LOC_Os04g50760 | Os04g0594000 | - | Detail |
| CX4g036141 | 4:25,771,143-25,772,449 | - | C1H4g24489 | C2H4g20252 | LOC_Os04g50770 | Os04g0594100 | OsMYB58/63, RRS1 | Detail |
| CX4g032540 | 4:25,785,599-25,786,015 | + | C1H4g12774 | C2H4g22220 | LOC_Os04g50780 | - | - | Detail |
| CX4g032235 | 4:25,787,183-25,791,483 | - | C1H4g03547 | C2H4g16603 | LOC_Os04g50790 | Os04g0594400 | - | Detail |
| CX4g035659 | 4:25,803,892-25,805,423 | - | C1H4g04447 | C2H4g30113 | LOC_Os04g50800 | Os04g0594500 | - | Detail |
| CX4g033566 | 4:25,806,659-25,807,018 | - | - | - | - | - | - | Detail |
| CX4g035919 | 4:25,809,649-25,812,409 | + | C1H4g28401 | C2H4g20855 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| CX4g031962 | 4:25,814,389-25,815,713 | + | C1H4g29726 | C2H4g08661 | LOC_Os04g50850 | Os04g0596200 | - | Detail |
| CX4g033700 | 4:25,816,294-25,818,781 | - | C1H4g13631 | C2H4g13854 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| CX4g035693 | 4:25,819,950-25,821,599 | - | C1H4g13351 | C2H4g30104 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| CX4g036181 | 4:25,823,524-25,828,273 | - | C1H4g21153 | C2H4g29365 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| CX4g032928 | 4:25,835,572-25,837,137 | - | C1H4g02289 | C2H4g17490 | LOC_Os04g50880 | Os04g0596900 | - | Detail |