| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000381 | 1:20,794,917-20,798,900 | + | C1H1g00408 | C2H1g24057 | LOC_Os01g41040 | Os01g0593600 | - | Detail |
| CX1g001186 | 1:20,802,987-20,805,957 | + | C1H1g30494 | C2H1g09012 | LOC_Os01g41050 | Os01g0593700 | - | Detail |
| CX1g002572 | 1:20,821,690-20,823,177 | + | C1H1g21011 | C2H1g27683 | LOC_Os01g41120 | Os01g0594300 | - | Detail |
| CX1g005324 | 1:20,826,665-20,827,264 | - | C1H1g11707 | C2H1g09622 | LOC_Os01g41140 | Os01g0594500 | - | Detail |
| CX1g000117 | 1:20,837,893-20,840,155 | - | C1H1g05215 | C2H1g17714 | LOC_Os11g10490 | Os01g0807000 | - | Detail |
| CX1g001213 | 1:20,840,831-20,842,087 | - | C1H1g21953 | C2H1g06797 | LOC_Os01g41160 | Os01g0594800 | - | Detail |
| CX1g000989 | 1:20,866,705-20,867,902 | - | C1H1g21953 | C2H1g06797 | LOC_Os01g41160 | Os01g0594800 | - | Detail |
| CX1g000945 | 1:20,872,915-20,873,894 | - | C1H1g13912 | C2H1g12627 | LOC_Os01g41170 | Os01g0594900 | - | Detail |
| CX1g006718 | 1:20,874,794-20,875,219 | - | - | - | LOC_Os01g41180 | Os01g0595001 | - | Detail |
| CX1g006069 | 1:20,877,945-20,878,172 | + | - | - | - | - | - | Detail |
| CX1g000070 | 1:20,881,482-20,886,787 | + | C1H1g21945 | C2H1g12390 | LOC_Os01g41190 | Os01g0595100 | - | Detail |
| CX1g002506 | 1:20,889,980-20,890,631 | + | C1H1g29329 | C2H1g04960 | LOC_Os01g41200 | Os01g0595201 | - | Detail |
| CX1g006295 | 1:20,892,931-20,893,107 | - | - | - | - | - | - | Detail |
| CX1g006784 | 1:20,896,935-20,897,411 | + | C1H1g29839 | C2H1g30431 | LOC_Os01g41220 | Os01g0595400 | - | Detail |
| CX1g003431 | 1:20,907,280-20,909,111 | + | C1H1g21495 | C2H1g07569 | LOC_Os01g41240 | Os01g0595600 | - | Detail |
| CX1g004382 | 1:20,948,255-20,949,107 | - | C1H1g30797 | C2H1g14392 | LOC_Os01g41340 | Os01g0595700 | OsRALyase1 | Detail |
| CX1g004552 | 1:20,983,672-20,985,569 | + | C1H1g13256 | C2H1g04295 | LOC_Os01g41400 | Os01g0597400 | - | Detail |
| CX1g003031 | 1:20,991,430-20,992,704 | + | C1H1g18149 | C2H1g04295 | LOC_Os01g41420 | Os01g0597600 | OsATL15 | Detail |
| CX1g000290 | 1:20,995,842-20,997,332 | + | C1H1g28205 | C2H1g05127 | LOC_Os01g41430 | Os01g0597800 | - | Detail |
| CX1g004587 | 1:20,999,802-21,001,271 | + | C1H1g28205 | C2H1g05127 | LOC_Os01g41450 | Os01g0598000 | - | Detail |