| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21284 | 3:7,667,753-7,671,804 | + | C1H3g22318 | CX3g026411 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| C2H3g07665 | 3:7,672,340-7,674,569 | - | C1H3g16209 | CX3g026305 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| C2H3g25611 | 3:7,677,527-7,680,546 | + | C1H3g16456 | CX3g029962 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| C2H3g15049 | 3:7,681,236-7,683,651 | + | C1H3g27080 | CX3g031298 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| C2H3g28537 | 3:7,692,151-7,694,983 | + | C1H3g26269 | CX3g025675 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| C2H3g24360 | 3:7,695,721-7,698,500 | - | C1H3g21286 | CX3g026951 | LOC_Os03g17060 | Os03g0265600 | - | Detail |
| C2H3g26554 | 3:7,701,539-7,712,106 | + | C1H3g15389 | CX3g030826 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| C2H3g04049 | 3:7,712,519-7,712,920 | + | C1H3g08685 | CX3g031044 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| C2H3g14157 | 3:7,713,212-7,714,578 | - | C1H3g02041 | CX3g030541 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| C2H3g30510 | 3:7,714,652-7,718,745 | + | C1H3g28556 | CX3g030784 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| C2H3g30669 | 3:7,721,019-7,722,939 | + | C1H3g03702 | CX3g027155 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| C2H3g06090 | 3:7,723,669-7,728,406 | - | C1H3g31409 | CX3g027025 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| C2H3g29477 | 3:7,728,940-7,729,425 | + | C1H3g24708 | CX3g028400 | LOC_Os03g15960 | Os03g0266300 | - | Detail |
| C2H3g08789 | 3:7,748,967-7,749,992 | - | C1H3g06192 | CX3g030422 | - | Os03g0666100 | - | Detail |
| C2H3g22167 | 3:7,759,717-7,764,832 | + | C1H3g06417 | CX3g028150 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| C2H3g11836 | 3:7,766,624-7,772,643 | + | C1H3g07398 | CX3g028162 | LOC_Os03g16010 | Os03g0266800 | - | Detail |
| C2H3g11139 | 3:7,776,675-7,777,148 | - | C1H3g14734 | CX3g027615 | LOC_Os03g16040 | Os03g0267200 | sHSP17.7, OSHSP17.7 | Detail |
| C2H3g24515 | 3:7,778,811-7,780,663 | - | C1H3g06904 | CX3g026398 | LOC_Os03g16050 | Os03g0267300 | - | Detail |
| C2H3g00254 | 3:7,789,712-7,792,803 | + | C1H3g31620 | CX3g030412 | LOC_Os03g16060 | Os03g0267500 | - | Detail |
| C2H3g01773 | 3:7,792,856-7,797,735 | - | C1H3g27649 | CX3g027859 | LOC_Os03g16070 | Os03g0267600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032304 | 4:24,966,573-24,967,510 | + | C1H8g00025 | C2H3g30332 | - | Os08g0132700 | - | Detail |
| CX4g036415 | 4:24,968,837-24,970,983 | - | C1H4g25724 | C2H4g06518 | LOC_Os04g48850 | Os04g0578000 | ACS2, OsACS2, Os-ACS2 | Detail |
| CX4g034320 | 4:24,973,936-24,974,377 | - | - | - | - | - | - | Detail |
| CX4g035808 | 4:24,980,130-24,980,726 | + | - | - | - | - | - | Detail |
| CX4g032177 | 4:24,985,811-24,987,004 | + | C1H4g24454 | C2H4g19030 | - | Os04g0578200 | - | Detail |
| CX4g033237 | 4:24,987,940-24,988,104 | - | - | - | - | - | - | Detail |
| CX4g035222 | 4:24,990,940-24,991,444 | + | C1H4g23154 | C2H4g16720 | LOC_Os04g48870 | Os04g0578300 | - | Detail |
| CX4g033101 | 4:24,995,637-24,997,157 | + | C1H4g05799 | C2H4g19270 | LOC_Os04g48880 | Os04g0578400 | - | Detail |
| CX4g036080 | 4:25,000,877-25,002,340 | + | C1H4g10126 | C2H4g07940 | - | Os04g0578550 | - | Detail |
| CX4g031675 | 4:25,005,040-25,007,796 | - | C1H4g19909 | C2H4g30133 | LOC_Os04g48930 | Os04g0578600 | OsFRO2, OsFRO1 | Detail |
| CX4g031656 | 4:25,011,790-25,016,186 | + | C1H4g18610 | C2H4g19460 | LOC_Os04g48940 | Os04g0578700 | - | Detail |
| CX4g031706 | 4:25,018,445-25,020,404 | - | C1H4g06167 | C2H4g08137 | LOC_Os04g48950 | Os04g0578800 | - | Detail |
| CX4g034007 | 4:25,032,026-25,032,667 | - | C1H4g17435 | C2H4g15292 | LOC_Os04g49000 | Os04g0579200 | - | Detail |
| CX4g036342 | 4:25,055,545-25,059,077 | + | C1H4g30135 | C2H4g00337 | LOC_Os04g52050 | Os04g0610000 | - | Detail |
| CX4g031363 | 4:25,062,606-25,064,471 | + | C1H4g02070 | C2H4g23542 | LOC_Os04g49060 | Os04g0579700 | - | Detail |
| CX4g036470 | 4:25,074,867-25,076,735 | - | C1H4g18122 | C2H4g12488 | LOC_Os04g49110 | Os04g0580300 | - | Detail |
| CX4g035401 | 4:25,093,549-25,094,505 | - | - | C2H4g09701 | LOC_Os04g49140 | Os04g0580500 | - | Detail |
| CX4g036099 | 4:25,102,599-25,108,102 | + | C1H4g28417 | C2H4g28180 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| CX4g031640 | 4:25,110,442-25,110,930 | - | C1H4g17435 | C2H4g29841 | LOC_Os04g49160 | Os04g0580800 | OsRFPH2-6 | Detail |
| CX4g034669 | 4:25,115,601-25,116,122 | - | - | C2H4g24583 | LOC_Os04g49170 | Os04g0580866 | - | Detail |