| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g00375 | 12:12,028,445-12,049,245 | - | C1H12g14155 | CX12g015869 | LOC_Os12g24170 | Os12g0429200 | - | Detail |
| C2H12g22470 | 12:12,079,801-12,080,399 | + | C1H12g03493 | CX12g018105 | - | Os12g0430900 | - | Detail |
| C2H12g14630 | 12:12,081,405-12,082,279 | + | C1H12g20362 | CX12g018105 | LOC_Os12g24240 | Os12g0430900 | - | Detail |
| C2H12g09366 | 12:12,082,630-12,096,521 | - | C1H12g01462 | CX12g016236 | LOC_Os12g24250 | Os12g0430000 | - | Detail |
| C2H12g04517 | 12:12,166,558-12,168,246 | + | C1H12g02746 | CX12g018132 | LOC_Os12g24320 | Os12g0431100 | - | Detail |
| C2H12g14972 | 12:12,184,433-12,186,723 | + | - | CX12g015770 | - | - | - | Detail |
| C2H12g16529 | 12:12,247,930-12,251,508 | + | C1H12g16885 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C2H12g01862 | 12:12,255,102-12,256,070 | - | C1H12g31271 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C2H12g16709 | 12:12,262,727-12,264,967 | + | - | CX12g017958 | LOC_Os12g24450 | - | - | Detail |
| C2H12g10767 | 12:12,293,874-12,294,431 | + | C1H12g09328 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C2H12g07580 | 12:12,314,982-12,315,738 | - | - | - | - | - | - | Detail |
| C2H12g22841 | 12:12,328,661-12,336,002 | - | C1H12g01818 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C2H12g15618 | 12:12,341,643-12,353,691 | - | C1H12g23644 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C2H12g05476 | 12:12,401,463-12,403,730 | + | C1H12g14351 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C2H12g16328 | 12:12,478,076-12,479,952 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g01529 | 12:12,483,694-12,488,936 | + | C1H12g23524 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C2H12g17979 | 12:12,603,817-12,604,768 | + | - | CX12g017727 | - | Os12g0435100 | - | Detail |
| C2H12g00049 | 12:12,614,681-12,616,411 | + | C1H12g19273 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C2H12g02093 | 12:12,626,417-12,627,007 | + | - | CX12g018692 | - | - | - | Detail |
| C2H12g11113 | 12:12,641,821-12,642,018 | - | C1H12g05019 | CX12g015912 | LOC_Os12g36210 | Os12g0548401 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032304 | 4:24,966,573-24,967,510 | + | C1H8g00025 | C2H3g30332 | - | Os08g0132700 | - | Detail |
| CX4g036415 | 4:24,968,837-24,970,983 | - | C1H4g25724 | C2H4g06518 | LOC_Os04g48850 | Os04g0578000 | ACS2, OsACS2, Os-ACS2 | Detail |
| CX4g034320 | 4:24,973,936-24,974,377 | - | - | - | - | - | - | Detail |
| CX4g035808 | 4:24,980,130-24,980,726 | + | - | - | - | - | - | Detail |
| CX4g032177 | 4:24,985,811-24,987,004 | + | C1H4g24454 | C2H4g19030 | - | Os04g0578200 | - | Detail |
| CX4g033237 | 4:24,987,940-24,988,104 | - | - | - | - | - | - | Detail |
| CX4g035222 | 4:24,990,940-24,991,444 | + | C1H4g23154 | C2H4g16720 | LOC_Os04g48870 | Os04g0578300 | - | Detail |
| CX4g033101 | 4:24,995,637-24,997,157 | + | C1H4g05799 | C2H4g19270 | LOC_Os04g48880 | Os04g0578400 | - | Detail |
| CX4g036080 | 4:25,000,877-25,002,340 | + | C1H4g10126 | C2H4g07940 | - | Os04g0578550 | - | Detail |
| CX4g031675 | 4:25,005,040-25,007,796 | - | C1H4g19909 | C2H4g30133 | LOC_Os04g48930 | Os04g0578600 | OsFRO2, OsFRO1 | Detail |
| CX4g031656 | 4:25,011,790-25,016,186 | + | C1H4g18610 | C2H4g19460 | LOC_Os04g48940 | Os04g0578700 | - | Detail |
| CX4g031706 | 4:25,018,445-25,020,404 | - | C1H4g06167 | C2H4g08137 | LOC_Os04g48950 | Os04g0578800 | - | Detail |
| CX4g034007 | 4:25,032,026-25,032,667 | - | C1H4g17435 | C2H4g15292 | LOC_Os04g49000 | Os04g0579200 | - | Detail |
| CX4g036342 | 4:25,055,545-25,059,077 | + | C1H4g30135 | C2H4g00337 | LOC_Os04g52050 | Os04g0610000 | - | Detail |
| CX4g031363 | 4:25,062,606-25,064,471 | + | C1H4g02070 | C2H4g23542 | LOC_Os04g49060 | Os04g0579700 | - | Detail |
| CX4g036470 | 4:25,074,867-25,076,735 | - | C1H4g18122 | C2H4g12488 | LOC_Os04g49110 | Os04g0580300 | - | Detail |
| CX4g035401 | 4:25,093,549-25,094,505 | - | - | C2H4g09701 | LOC_Os04g49140 | Os04g0580500 | - | Detail |
| CX4g036099 | 4:25,102,599-25,108,102 | + | C1H4g28417 | C2H4g28180 | LOC_Os04g49150 | Os04g0580700 | MADS17, OsMADS17, NMADS3, RMADS213, nmads3 | Detail |
| CX4g031640 | 4:25,110,442-25,110,930 | - | C1H4g17435 | C2H4g29841 | LOC_Os04g49160 | Os04g0580800 | OsRFPH2-6 | Detail |
| CX4g034669 | 4:25,115,601-25,116,122 | - | - | C2H4g24583 | LOC_Os04g49170 | Os04g0580866 | - | Detail |