| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g19073 | 9:15,635,940-15,636,245 | - | C1H9g13405 | CX9g055841 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g18629 | 9:15,645,202-15,646,614 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30510 | Os09g0482860 | - | Detail |
| C2H9g07652 | 9:15,652,256-15,652,732 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g29260 | 9:15,652,813-15,653,379 | - | C1H9g23005 | CX9g057859 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C2H9g17054 | 9:15,660,942-15,661,916 | + | - | - | - | - | - | Detail |
| C2H9g17845 | 9:15,666,891-15,667,313 | + | C1H9g13668 | CX9g057607 | LOC_Os09g31025 | Os09g0483300 | - | Detail |
| C2H9g03683 | 9:15,669,227-15,669,756 | + | - | - | - | - | - | Detail |
| C2H9g03838 | 9:15,671,286-15,673,112 | - | C1H9g12952 | CX9g057792 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| C2H9g25938 | 9:15,688,650-15,695,073 | - | C1H9g10463 | CX9g055724 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| C2H9g09529 | 9:15,714,246-15,716,121 | + | C1H9g25716 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C2H9g06729 | 9:15,723,060-15,725,638 | + | C1H9g21552 | CX9g055844 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| C2H9g05554 | 9:15,744,629-15,749,440 | + | C1H9g28280 | CX9g057232 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| C2H9g12865 | 9:15,757,978-15,759,283 | + | C1H9g16686 | CX9g057421 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| C2H9g08271 | 9:15,759,761-15,761,485 | - | C1H9g09571 | CX9g056446 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| C2H9g29447 | 9:15,761,838-15,762,480 | - | - | CX9g057305 | - | Os09g0485950 | - | Detail |
| C2H9g15653 | 9:15,761,911-15,762,471 | + | C1H9g07652 | - | LOC_Os09g31190 | Os09g0486000 | - | Detail |
| C2H9g10052 | 9:15,766,622-15,767,116 | + | C1H9g10100 | CX9g058060 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| C2H9g09908 | 9:15,775,628-15,777,004 | + | C1H9g04466 | CX9g056228 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| C2H9g21283 | 9:15,784,041-15,784,806 | + | - | - | - | - | - | Detail |
| C2H9g06324 | 9:15,785,151-15,790,314 | - | C1H9g26143 | CX9g057251 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035866 | 4:24,501,188-24,504,273 | + | C1H4g12555 | C2H4g26180 | LOC_Os04g47970 | Os04g0567700 | - | Detail |
| CX4g035043 | 4:24,512,697-24,513,788 | - | C1H4g18335 | C2H4g30292 | LOC_Os04g47990 | Os04g0567800 | OsDOF18 | Detail |
| CX4g032721 | 4:24,534,889-24,535,071 | - | - | - | - | - | - | Detail |
| CX4g033881 | 4:24,540,311-24,540,490 | - | C1H4g20138 | - | - | - | - | Detail |
| CX4g033760 | 4:24,545,183-24,547,952 | + | C1H4g26603 | C2H4g14855 | LOC_Os04g48010 | Os04g0568400 | OsKRN2 | Detail |
| CX4g034406 | 4:24,553,928-24,554,515 | + | C1H4g30299 | C2H4g14653 | LOC_Os04g48020 | Os04g0568600 | - | Detail |
| CX4g035791 | 4:24,555,260-24,556,430 | - | - | - | - | Os04g0568751 | - | Detail |
| CX4g033771 | 4:24,558,255-24,572,027 | - | C1H4g04331 | C2H4g04717 | LOC_Os04g48040 | Os04g0568850 | - | Detail |
| CX4g035675 | 4:24,573,407-24,576,614 | - | C1H4g22901 | C2H4g27476 | LOC_Os04g48050 | Os04g0568900 | OsRINGzf1 | Detail |
| CX4g033911 | 4:24,582,518-24,582,844 | - | - | - | - | - | - | Detail |
| CX4g036264 | 4:24,584,509-24,587,341 | + | C1H4g15838 | C2H4g06051 | LOC_Os04g48060 | Os04g0569000 | OsRFC4 | Detail |
| CX4g033862 | 4:24,588,575-24,594,277 | - | C1H4g17902 | C2H4g02683 | LOC_Os04g48070 | Os04g0569100 | ROC4, Roc4 | Detail |
| CX4g034306 | 4:24,596,650-24,596,805 | + | C1H4g20138 | - | - | - | - | Detail |
| CX4g036050 | 4:24,597,026-24,597,193 | - | - | - | - | - | - | Detail |
| CX4g035902 | 4:24,607,565-24,608,977 | + | C1H4g21535 | C2H4g16788 | LOC_Os04g48130 | Os04g0569300 | - | Detail |
| CX4g031968 | 4:24,609,875-24,613,703 | - | C1H4g08980 | C2H4g20649 | LOC_Os04g48140 | Os04g0569400 | - | Detail |
| CX4g034977 | 4:24,625,454-24,627,615 | - | C1H4g04673 | C2H4g00953 | LOC_Os04g48160 | Os04g0569900 | - | Detail |
| CX4g033784 | 4:24,636,733-24,640,566 | - | C1H4g18526 | C2H4g17853 | LOC_Os04g48170 | Os04g0570000 | CYP87A3 | Detail |
| CX4g031367 | 4:24,658,137-24,669,893 | - | C1H4g29930 | C2H4g14427 | LOC_Os04g48200 | Os04g0570500 | - | Detail |
| CX4g033156 | 4:24,674,506-24,677,723 | - | C1H4g03867 | C2H4g06266 | LOC_Os04g48230 | Os04g0570800 | - | Detail |