| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g21635 | 5:1,800,625-1,801,726 | + | C2H5g10317 | CX5g038822 | LOC_Os05g04470 | Os05g0135200 | - | Detail |
| C1H5g11348 | 5:1,806,814-1,808,174 | + | C2H5g12500 | CX5g038822 | LOC_Os05g04490 | Os05g0135400 | OsPRX70 | Detail |
| C1H5g11788 | 5:1,813,487-1,815,667 | + | C2H5g16100 | CX5g038822 | LOC_Os05g04500 | Os05g0135500 | - | Detail |
| C1H5g05411 | 5:1,823,550-1,824,740 | + | C2H1g10329 | CX5g039963 | LOC_Os05g04510 | Os05g0135700 | - | Detail |
| C1H5g15318 | 5:1,829,349-1,833,577 | + | C2H5g15340 | CX5g039240 | LOC_Os05g04520 | Os05g0135800 | RLCK178, OsPti1a, OsRLCK178 | Detail |
| C1H5g22825 | 5:1,834,109-1,836,299 | - | C2H5g09071 | CX5g040556 | LOC_Os05g04530 | Os05g0135900 | - | Detail |
| C1H5g04500 | 5:1,841,006-1,842,757 | + | C2H5g21536 | - | - | - | - | Detail |
| C1H5g10755 | 5:1,855,741-1,859,524 | - | C2H5g01548 | CX5g039210 | LOC_Os05g04550 | Os05g0136200 | - | Detail |
| C1H5g22395 | 5:1,864,782-1,869,273 | + | - | - | - | Os05g0136400 | - | Detail |
| C1H5g30580 | 5:1,888,889-1,895,075 | + | C2H5g23155 | CX5g040521 | LOC_Os05g04584 | Os05g0136900 | OsPMT2, OsAT3 | Detail |
| C1H5g18480 | 5:1,908,700-1,914,968 | + | C2H5g06046 | CX5g040420 | LOC_Os05g04610 | Os05g0137200 | - | Detail |
| C1H5g19392 | 5:1,915,781-1,917,452 | + | C2H5g14079 | CX5g039843 | LOC_Os05g04620 | Os05g0137300 | - | Detail |
| C1H5g26357 | 5:1,918,487-1,922,420 | + | C2H5g14963 | CX5g040603 | LOC_Os05g04630 | Os05g0137400 | - | Detail |
| C1H5g12317 | 5:1,922,878-1,928,299 | - | C2H5g23559 | CX5g036724 | LOC_Os05g04640 | Os05g0137500 | OsWRKY5 | Detail |
| C1H5g04306 | 5:1,939,992-1,941,266 | + | C2H5g03222 | CX5g037574 | LOC_Os05g04650 | Os05g0137600 | - | Detail |
| C1H5g13155 | 5:1,941,560-1,943,068 | - | C2H5g28363 | - | LOC_Os05g04660 | Os05g0137700 | - | Detail |
| C1H5g04433 | 5:1,960,400-1,960,992 | - | C2H5g07352 | CX1g002314 | LOC_Os05g04700 | Os05g0138300 | OsLti6b | Detail |
| C1H5g25088 | 5:1,984,002-1,985,777 | + | C2H5g19962 | CX5g037589 | LOC_Os05g04740 | Os05g0139100 | APG | Detail |
| C1H5g25511 | 5:1,988,776-1,989,975 | - | C2H5g25266 | CX5g037123 | LOC_Os05g04750 | Os05g0139200 | - | Detail |
| C1H5g18751 | 5:1,997,995-1,999,179 | - | C2H5g23665 | CX5g037123 | LOC_Os05g04770 | Os05g0139300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036655 | 4:24,297,477-24,300,285 | - | C1H4g07757 | C2H4g03895 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| CX4g036311 | 4:24,304,580-24,306,751 | - | C1H4g23508 | C2H4g00625 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| CX4g031734 | 4:24,309,984-24,311,774 | + | C1H4g06710 | C2H4g08419 | LOC_Os04g47680 | Os04g0564500 | - | Detail |
| CX4g034730 | 4:24,312,787-24,315,064 | + | C1H4g12463 | C2H4g16306 | LOC_Os04g47690 | Os04g0564600 | - | Detail |
| CX4g032075 | 4:24,316,102-24,324,519 | - | C1H4g11500 | C2H4g03354 | LOC_Os04g47700 | Os04g0564700 | - | Detail |
| CX4g034423 | 4:24,328,138-24,329,532 | + | C1H4g14049 | C2H4g19275 | LOC_Os04g47720 | Os04g0565200 | - | Detail |
| CX4g033452 | 4:24,333,019-24,334,413 | + | C1H4g12974 | C2H4g12702 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| CX4g033372 | 4:24,338,463-24,339,746 | - | C1H4g26844 | C2H4g19005 | LOC_Os04g47780 | Os04g0565500 | - | Detail |
| CX4g033977 | 4:24,348,310-24,350,493 | - | C1H4g15072 | C2H4g09609 | LOC_Os04g47810 | Os04g0565900 | - | Detail |
| CX4g032145 | 4:24,354,510-24,354,875 | - | - | C2H4g21812 | LOC_Os04g47820 | Os04g0566000 | - | Detail |
| CX4g035302 | 4:24,357,533-24,362,974 | + | C1H4g12877 | C2H4g10718 | LOC_Os04g47830 | Os04g0566100 | OsCHR714, CHR714 | Detail |
| CX4g032184 | 4:24,383,348-24,383,623 | - | - | - | - | - | - | Detail |
| CX4g031939 | 4:24,400,563-24,406,268 | + | C1H4g23807 | C2H4g15154 | LOC_Os04g47860 | Os04g0566400 | IDD10, OsIDD10 | Detail |
| CX4g034055 | 4:24,411,010-24,411,183 | - | - | - | - | - | - | Detail |
| CX4g034886 | 4:24,415,362-24,421,905 | - | C1H4g26156 | C2H4g00740 | LOC_Os04g47870 | Os04g0566500 | - | Detail |
| CX4g033126 | 4:24,459,888-24,463,023 | + | C1H4g22653 | C2H4g20556 | LOC_Os04g47890 | Os04g0566600 | MOF1, MFS2 | Detail |
| CX4g033952 | 4:24,467,595-24,468,170 | - | - | C2H4g16258 | LOC_Os04g47900 | Os04g0566700 | - | Detail |
| CX4g034435 | 4:24,470,877-24,471,071 | - | - | - | - | - | - | Detail |
| CX4g032363 | 4:24,472,532-24,482,395 | - | C1H4g17812 | C2H4g14707 | LOC_Os04g47912 | Os04g0566800 | - | Detail |
| CX4g031995 | 4:24,485,832-24,487,621 | - | C1H4g21181 | C2H4g15294 | LOC_Os04g47930 | Os04g0567200 | - | Detail |