| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g13150 | 1:19,719,183-19,724,304 | - | C2H1g07054 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C1H1g28155 | 1:19,742,455-19,742,760 | - | C2H1g05454 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C1H1g07908 | 1:19,752,564-19,757,343 | + | C2H1g24859 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C1H1g29752 | 1:19,758,224-19,764,239 | + | C2H1g10171 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C1H1g31440 | 1:19,764,424-19,766,997 | - | C2H1g01556 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C1H1g24447 | 1:19,774,505-19,775,401 | - | C2H1g15345 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C1H1g25426 | 1:19,804,916-19,813,361 | + | C2H1g03847 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C1H1g10200 | 1:19,824,319-19,828,019 | + | C2H1g02368 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C1H1g31451 | 1:19,845,647-19,862,874 | - | C2H1g09392 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C1H1g30977 | 1:19,904,946-19,907,110 | + | C2H1g15351 | - | LOC_Os01g39430 | Os01g0576100 | Rb1 | Detail |
| C1H1g22058 | 1:19,919,583-19,923,825 | + | C2H1g23511 | CX1g004267 | LOC_Os01g39580 | Os01g0575701 | - | Detail |
| C1H1g30169 | 1:20,001,847-20,002,962 | + | C2H1g23392 | CX1g004267 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C1H1g25385 | 1:20,016,397-20,019,710 | - | C2H1g00498 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C1H1g03498 | 1:20,034,003-20,038,602 | - | C2H1g04424 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C1H1g20612 | 1:20,043,128-20,049,701 | - | C2H1g11258 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C1H1g26503 | 1:20,059,781-20,060,829 | + | C2H1g04472 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C1H1g02081 | 1:20,062,715-20,064,890 | + | C2H1g18851 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C1H1g21250 | 1:20,113,505-20,116,419 | + | C2H1g09591 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C1H1g07602 | 1:20,121,740-20,124,076 | + | C2H1g01010 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C1H1g16386 | 1:20,124,940-20,128,086 | - | C2H1g23706 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036655 | 4:24,297,477-24,300,285 | - | C1H4g07757 | C2H4g03895 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| CX4g036311 | 4:24,304,580-24,306,751 | - | C1H4g23508 | C2H4g00625 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| CX4g031734 | 4:24,309,984-24,311,774 | + | C1H4g06710 | C2H4g08419 | LOC_Os04g47680 | Os04g0564500 | - | Detail |
| CX4g034730 | 4:24,312,787-24,315,064 | + | C1H4g12463 | C2H4g16306 | LOC_Os04g47690 | Os04g0564600 | - | Detail |
| CX4g032075 | 4:24,316,102-24,324,519 | - | C1H4g11500 | C2H4g03354 | LOC_Os04g47700 | Os04g0564700 | - | Detail |
| CX4g034423 | 4:24,328,138-24,329,532 | + | C1H4g14049 | C2H4g19275 | LOC_Os04g47720 | Os04g0565200 | - | Detail |
| CX4g033452 | 4:24,333,019-24,334,413 | + | C1H4g12974 | C2H4g12702 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| CX4g033372 | 4:24,338,463-24,339,746 | - | C1H4g26844 | C2H4g19005 | LOC_Os04g47780 | Os04g0565500 | - | Detail |
| CX4g033977 | 4:24,348,310-24,350,493 | - | C1H4g15072 | C2H4g09609 | LOC_Os04g47810 | Os04g0565900 | - | Detail |
| CX4g032145 | 4:24,354,510-24,354,875 | - | - | C2H4g21812 | LOC_Os04g47820 | Os04g0566000 | - | Detail |
| CX4g035302 | 4:24,357,533-24,362,974 | + | C1H4g12877 | C2H4g10718 | LOC_Os04g47830 | Os04g0566100 | OsCHR714, CHR714 | Detail |
| CX4g032184 | 4:24,383,348-24,383,623 | - | - | - | - | - | - | Detail |
| CX4g031939 | 4:24,400,563-24,406,268 | + | C1H4g23807 | C2H4g15154 | LOC_Os04g47860 | Os04g0566400 | IDD10, OsIDD10 | Detail |
| CX4g034055 | 4:24,411,010-24,411,183 | - | - | - | - | - | - | Detail |
| CX4g034886 | 4:24,415,362-24,421,905 | - | C1H4g26156 | C2H4g00740 | LOC_Os04g47870 | Os04g0566500 | - | Detail |
| CX4g033126 | 4:24,459,888-24,463,023 | + | C1H4g22653 | C2H4g20556 | LOC_Os04g47890 | Os04g0566600 | MOF1, MFS2 | Detail |
| CX4g033952 | 4:24,467,595-24,468,170 | - | - | C2H4g16258 | LOC_Os04g47900 | Os04g0566700 | - | Detail |
| CX4g034435 | 4:24,470,877-24,471,071 | - | - | - | - | - | - | Detail |
| CX4g032363 | 4:24,472,532-24,482,395 | - | C1H4g17812 | C2H4g14707 | LOC_Os04g47912 | Os04g0566800 | - | Detail |
| CX4g031995 | 4:24,485,832-24,487,621 | - | C1H4g21181 | C2H4g15294 | LOC_Os04g47930 | Os04g0567200 | - | Detail |