| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g29538 | 2:28,623,770-28,627,762 | - | C2H2g01303 | CX2g024594 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| C1H2g23191 | 2:28,629,885-28,634,838 | - | C2H2g07487 | CX2g022323 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| C1H2g05032 | 2:28,642,060-28,644,192 | + | C2H2g08168 | CX2g022360 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| C1H2g28990 | 2:28,649,362-28,652,256 | - | C2H2g17927 | CX2g022714 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| C1H2g29361 | 2:28,659,961-28,660,685 | + | C2H2g17969 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C1H2g08078 | 2:28,661,942-28,663,062 | + | C2H2g17969 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C1H2g10044 | 2:28,670,777-28,676,613 | - | C2H2g17512 | - | - | - | - | Detail |
| C1H2g22873 | 2:28,674,191-28,676,356 | + | C2H2g06955 | CX2g024809 | LOC_Os02g42970 | Os02g0745300 | - | Detail |
| C1H2g26267 | 2:28,680,083-28,682,042 | + | C2H2g19332 | CX2g024083 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| C1H2g29615 | 2:28,683,459-28,689,906 | + | C2H2g06018 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C1H2g00830 | 2:28,690,893-28,693,076 | + | C2H2g18017 | CX2g024841 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| C1H2g30172 | 2:28,694,047-28,698,417 | + | C2H2g26607 | CX2g020073 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| C1H2g23262 | 2:28,701,317-28,704,403 | - | C2H2g23677 | CX2g022616 | LOC_Os02g51180 | Os02g0746000 | CUL3A, OsCUL3a | Detail |
| C1H2g29916 | 2:28,742,847-28,744,056 | - | - | - | LOC_Os02g58180 | - | - | Detail |
| C1H2g09862 | 2:28,762,511-28,764,482 | + | C2H2g20238 | CX2g024649 | LOC_Os02g51290 | Os02g0747500 | - | Detail |
| C1H2g31845 | 2:28,765,176-28,769,388 | - | C2H2g08371 | CX2g020731 | LOC_Os02g51300 | Os02g0747600 | - | Detail |
| C1H2g24533 | 2:28,776,335-28,776,828 | - | C2H2g00887 | CX2g020483 | LOC_Os02g51320 | Os02g0747900 | ILI5, OsBUL1, PGL2 | Detail |
| C1H2g27272 | 2:28,786,325-28,791,753 | - | C2H2g18570 | CX2g019270 | LOC_Os02g51330 | Os02g0748100 | - | Detail |
| C1H2g12274 | 2:28,796,040-28,798,803 | - | C2H2g16535 | CX2g021584 | LOC_Os02g51350 | Os02g0748300 | - | Detail |
| C1H2g22698 | 2:28,818,304-28,829,292 | + | C2H2g14137 | CX2g024543 | LOC_Os02g51400 | Os02g0749150 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036655 | 4:24,297,477-24,300,285 | - | C1H4g07757 | C2H4g03895 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| CX4g036311 | 4:24,304,580-24,306,751 | - | C1H4g23508 | C2H4g00625 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| CX4g031734 | 4:24,309,984-24,311,774 | + | C1H4g06710 | C2H4g08419 | LOC_Os04g47680 | Os04g0564500 | - | Detail |
| CX4g034730 | 4:24,312,787-24,315,064 | + | C1H4g12463 | C2H4g16306 | LOC_Os04g47690 | Os04g0564600 | - | Detail |
| CX4g032075 | 4:24,316,102-24,324,519 | - | C1H4g11500 | C2H4g03354 | LOC_Os04g47700 | Os04g0564700 | - | Detail |
| CX4g034423 | 4:24,328,138-24,329,532 | + | C1H4g14049 | C2H4g19275 | LOC_Os04g47720 | Os04g0565200 | - | Detail |
| CX4g033452 | 4:24,333,019-24,334,413 | + | C1H4g12974 | C2H4g12702 | LOC_Os04g47770 | Os04g0565400 | CZOGT3, OscZOGT3, cZOGT3 | Detail |
| CX4g033372 | 4:24,338,463-24,339,746 | - | C1H4g26844 | C2H4g19005 | LOC_Os04g47780 | Os04g0565500 | - | Detail |
| CX4g033977 | 4:24,348,310-24,350,493 | - | C1H4g15072 | C2H4g09609 | LOC_Os04g47810 | Os04g0565900 | - | Detail |
| CX4g032145 | 4:24,354,510-24,354,875 | - | - | C2H4g21812 | LOC_Os04g47820 | Os04g0566000 | - | Detail |
| CX4g035302 | 4:24,357,533-24,362,974 | + | C1H4g12877 | C2H4g10718 | LOC_Os04g47830 | Os04g0566100 | OsCHR714, CHR714 | Detail |
| CX4g032184 | 4:24,383,348-24,383,623 | - | - | - | - | - | - | Detail |
| CX4g031939 | 4:24,400,563-24,406,268 | + | C1H4g23807 | C2H4g15154 | LOC_Os04g47860 | Os04g0566400 | IDD10, OsIDD10 | Detail |
| CX4g034055 | 4:24,411,010-24,411,183 | - | - | - | - | - | - | Detail |
| CX4g034886 | 4:24,415,362-24,421,905 | - | C1H4g26156 | C2H4g00740 | LOC_Os04g47870 | Os04g0566500 | - | Detail |
| CX4g033126 | 4:24,459,888-24,463,023 | + | C1H4g22653 | C2H4g20556 | LOC_Os04g47890 | Os04g0566600 | MOF1, MFS2 | Detail |
| CX4g033952 | 4:24,467,595-24,468,170 | - | - | C2H4g16258 | LOC_Os04g47900 | Os04g0566700 | - | Detail |
| CX4g034435 | 4:24,470,877-24,471,071 | - | - | - | - | - | - | Detail |
| CX4g032363 | 4:24,472,532-24,482,395 | - | C1H4g17812 | C2H4g14707 | LOC_Os04g47912 | Os04g0566800 | - | Detail |
| CX4g031995 | 4:24,485,832-24,487,621 | - | C1H4g21181 | C2H4g15294 | LOC_Os04g47930 | Os04g0567200 | - | Detail |