| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03150 | 1:32,023,811-32,028,243 | - | C1H1g05990 | CX1g006004 | LOC_Os01g62510 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g15515 | 1:32,041,546-32,042,130 | - | C1H1g19031 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| C2H1g08528 | 1:32,052,668-32,053,780 | - | C1H1g19031 | CX1g006003 | LOC_Os01g62560 | - | - | Detail |
| C2H1g16142 | 1:32,055,376-32,061,997 | + | C1H1g16879 | CX1g005275 | LOC_Os01g62570 | Os01g0843300 | - | Detail |
| C2H1g29809 | 1:32,068,801-32,069,783 | + | C1H1g11813 | CX1g005906 | LOC_Os01g62600 | Os01g0843800 | - | Detail |
| C2H1g10545 | 1:32,070,185-32,071,425 | + | C1H1g11813 | CX1g005906 | LOC_Os01g62600 | Os01g0842500 | - | Detail |
| C2H1g06815 | 1:32,083,725-32,084,809 | + | C1H1g04507 | CX1g003486 | LOC_Os01g62610 | Os01g0844300 | OsFKBP20-1b | Detail |
| C2H1g25771 | 1:32,085,534-32,089,912 | - | C1H1g01125 | CX1g003345 | LOC_Os01g62620 | Os01g0844400 | - | Detail |
| C2H1g22722 | 1:32,105,359-32,105,887 | + | C1H1g20147 | - | - | - | - | Detail |
| C2H1g26004 | 1:32,115,263-32,122,680 | + | C1H1g08181 | CX1g005061 | LOC_Os01g62650 | Os01g0844800 | - | Detail |
| C2H1g26466 | 1:32,148,007-32,150,019 | + | C1H1g19830 | CX1g004761 | LOC_Os01g62760 | Os01g0846300 | - | Detail |
| C2H1g02239 | 1:32,151,032-32,151,428 | + | C1H1g10954 | CX1g001759 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| C2H1g17015 | 1:32,158,441-32,170,631 | + | C1H1g22173 | CX1g003923 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| C2H1g07497 | 1:32,172,952-32,178,958 | - | C1H1g30030 | CX1g002085 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| C2H1g09826 | 1:32,180,092-32,188,818 | - | C1H1g20533 | - | - | - | - | Detail |
| C2H1g05456 | 1:32,192,702-32,197,731 | + | C1H1g13164 | CX1g004720 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| C2H1g21397 | 1:32,198,439-32,203,209 | - | C1H1g18933 | CX1g004243 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| C2H1g26544 | 1:32,206,772-32,207,209 | - | - | CX1g004162 | - | - | - | Detail |
| C2H1g03584 | 1:32,208,762-32,211,224 | + | C1H1g23016 | CX1g005615 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| C2H1g03289 | 1:32,212,302-32,216,802 | - | C1H1g02630 | CX1g001706 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035358 | 4:24,074,660-24,074,863 | - | C1H3g22770 | C2H6g01574 | LOC_Os06g13330 | Os06g0241200 | - | Detail |
| CX4g033495 | 4:24,076,763-24,078,910 | + | C1H4g07049 | C2H4g24237 | LOC_Os04g47150 | Os04g0558900 | - | Detail |
| CX4g032191 | 4:24,080,906-24,081,415 | - | - | - | - | - | - | Detail |
| CX4g034159 | 4:24,085,128-24,087,416 | - | C1H4g07049 | C2H4g27313 | LOC_Os04g47160 | Os04g0559000 | - | Detail |
| CX4g035913 | 4:24,093,557-24,095,532 | + | C1H4g25980 | C2H4g22229 | LOC_Os04g47170 | Os04g0559100 | - | Detail |
| CX4g034722 | 4:24,096,246-24,100,015 | - | C1H4g30198 | C2H4g00730 | LOC_Os04g47180 | Os04g0559200 | - | Detail |
| CX4g035770 | 4:24,106,919-24,110,698 | - | C1H4g26769 | C2H4g15295 | LOC_Os04g47190 | Os04g0559400 | - | Detail |
| CX4g036556 | 4:24,112,807-24,113,019 | + | - | - | - | - | - | Detail |
| CX4g032090 | 4:24,118,265-24,119,818 | + | C1H4g23739 | C2H4g05213 | LOC_Os04g47220 | Os04g0559700 | OsPIP1;2 | Detail |
| CX4g034281 | 4:24,120,023-24,127,500 | - | C1H4g10381 | C2H4g27920 | LOC_Os04g47240 | Os04g0559800 | SMG2, OsMKKK10, MKKK10, SMG2/OsMKKK10 | Detail |
| CX4g036308 | 4:24,132,449-24,134,230 | + | - | - | - | - | - | Detail |
| CX4g032012 | 4:24,136,221-24,137,457 | + | C1H4g01866 | C2H4g00919 | LOC_Os04g47260 | Os04g0560200 | - | Detail |
| CX4g034678 | 4:24,138,312-24,141,080 | - | C1H4g14235 | C2H4g23249 | LOC_Os04g47270 | Os04g0560300 | - | Detail |
| CX4g031503 | 4:24,142,093-24,145,053 | - | C1H4g22466 | C2H4g15141 | LOC_Os04g47280 | Os04g0560400 | - | Detail |
| CX4g034744 | 4:24,147,465-24,151,087 | + | C1H4g11646 | C2H4g28578 | LOC_Os04g47290 | Os04g0560500 | - | Detail |
| CX4g033341 | 4:24,151,569-24,154,112 | - | C1H4g00637 | C2H4g00072 | LOC_Os04g47300 | Os04g0560600 | CDPK12, OsCDPK12, OsCPK12, ESL4 | Detail |
| CX4g033231 | 4:24,157,743-24,158,936 | + | C1H4g08087 | C2H4g08768 | LOC_Os04g47310 | Os04g0560700 | - | Detail |
| CX4g036555 | 4:24,162,486-24,165,704 | + | C1H4g01520 | C2H4g05524 | LOC_Os04g47320 | Os04g0561000 | - | Detail |
| CX4g033871 | 4:24,167,554-24,168,345 | - | C1H4g11046 | C2H4g24329 | LOC_Os04g47330 | Os04g0561200 | OsROP | Detail |
| CX4g034561 | 4:24,172,745-24,177,043 | + | C1H4g17483 | C2H4g08693 | LOC_Os04g47360 | Os04g0561500 | - | Detail |