| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g22870 | 1:4,587,065-4,587,664 | - | C1H1g28329 | CX1g000104 | LOC_Os01g10010 | Os01g0196500 | - | Detail |
| C2H1g12871 | 1:4,589,682-4,591,118 | + | C1H1g05499 | CX1g005979 | LOC_Os01g10020 | Os01g0196600 | - | Detail |
| C2H1g28373 | 1:4,605,875-4,613,282 | + | C1H1g14618 | CX1g004524 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| C2H1g18174 | 1:4,615,122-4,620,409 | - | C1H1g20387 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C2H1g08298 | 1:4,623,015-4,623,565 | + | - | CX1g005103 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| C2H1g17197 | 1:4,624,739-4,627,138 | + | C1H1g24747 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C2H1g01272 | 1:4,627,592-4,629,505 | - | C1H1g01968 | CX1g004435 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| C2H1g12602 | 1:4,630,262-4,632,510 | - | C1H1g23699 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C2H1g29964 | 1:4,638,301-4,642,740 | - | C1H1g02388 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C2H1g10405 | 1:4,651,798-4,653,068 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10130 | Os01g0197900 | OsRDR3 | Detail |
| C2H1g14250 | 1:4,653,235-4,665,018 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g22382 | 1:4,665,514-4,666,916 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g06287 | 1:4,668,151-4,669,334 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g09190 | 1:4,669,519-4,679,023 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g16198 | 1:4,679,850-4,683,835 | - | C1H1g16458 | CX1g006534 | - | Os01g0198000 | OsRDR4 | Detail |
| C2H1g26620 | 1:4,688,816-4,695,355 | - | C1H1g16973 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C2H1g23718 | 1:4,705,402-4,706,118 | - | C1H1g29548 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C2H1g20955 | 1:4,726,171-4,726,818 | + | - | CX1g000304 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| C2H1g09712 | 1:4,734,659-4,735,255 | + | - | CX1g000572 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| C2H1g26709 | 1:4,738,822-4,743,043 | - | C1H1g25179 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003246 | 1:20,628,234-20,630,472 | + | C1H1g31314 | C2H1g30216 | LOC_Os01g40650 | Os01g0589100 | - | Detail |
| CX1g004824 | 1:20,631,670-20,632,674 | + | C1H1g23646 | C2H1g24417 | LOC_Os01g40660 | Os01g0589200 | - | Detail |
| CX1g003468 | 1:20,633,442-20,636,220 | + | C1H1g04286 | C2H1g29264 | LOC_Os01g40670 | Os01g0589300 | - | Detail |
| CX1g004926 | 1:20,637,432-20,639,051 | - | C1H1g01968 | C2H1g00767 | LOC_Os01g40680 | Os01g0589400 | - | Detail |
| CX1g003530 | 1:20,646,522-20,647,477 | + | C1H1g16298 | C2H1g07363 | LOC_Os01g40700 | Os01g0589700 | - | Detail |
| CX1g001664 | 1:20,649,274-20,650,344 | + | C1H1g09473 | C2H1g20918 | LOC_Os01g40710 | Os01g0589800 | - | Detail |
| CX1g002988 | 1:20,651,259-20,654,438 | - | C1H1g18827 | C2H1g17732 | LOC_Os01g40720 | Os01g0589900 | - | Detail |
| CX1g001889 | 1:20,658,359-20,658,583 | + | - | - | - | Os01g0530100 | - | Detail |
| CX1g002851 | 1:20,659,626-20,663,355 | - | C1H1g06563 | C2H1g01074 | LOC_Os01g40730 | Os01g0590100 | - | Detail |
| CX1g003227 | 1:20,668,390-20,670,761 | - | C1H1g04863 | C2H1g11817 | LOC_Os01g40750 | Os01g0590200 | - | Detail |
| CX1g001510 | 1:20,678,541-20,682,287 | + | C1H1g21465 | C2H1g08838 | LOC_Os01g40840 | Os01g0590900 | - | Detail |
| CX1g001139 | 1:20,684,988-20,692,074 | + | C1H1g03355 | C2H1g03915 | LOC_Os01g40860 | Os01g0591000 | - | Detail |
| CX1g007057 | 1:20,700,425-20,706,360 | + | C1H1g05812 | C2H1g02779 | LOC_Os01g40870 | Os01g0591300 | - | Detail |
| CX1g000400 | 1:20,728,278-20,729,012 | + | C1H1g02485 | - | LOC_Os01g40970 | Os01g0863800 | - | Detail |
| CX1g005219 | 1:20,731,689-20,743,292 | - | C1H1g29395 | C2H1g16829 | LOC_Os01g40980 | Os01g0592900 | - | Detail |
| CX1g003687 | 1:20,743,926-20,767,592 | + | C1H1g29556 | C2H1g25414 | LOC_Os01g40990 | Os01g0593000 | - | Detail |
| CX1g001975 | 1:20,768,928-20,769,577 | - | C1H1g00280 | C2H1g01091 | LOC_Os01g41000 | Os01g0593100 | - | Detail |
| CX1g002902 | 1:20,775,716-20,775,955 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001665 | 1:20,779,695-20,781,132 | + | C1H1g24663 | C2H1g26660 | LOC_Os01g41010 | Os01g0593200 | OsFLZ2 | Detail |
| CX1g004416 | 1:20,790,225-20,792,995 | - | C1H1g03158 | C2H1g01729 | LOC_Os01g41030 | Os01g0593500 | - | Detail |