| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18526 | 2:29,792,749-29,793,847 | + | C1H2g11022 | CX2g022902 | LOC_Os02g53230 | - | - | Detail |
| C2H2g03730 | 2:29,795,166-29,795,429 | - | C1H2g26130 | CX2g024189 | LOC_Os02g53250 | Os02g0772200 | - | Detail |
| C2H2g25549 | 2:29,797,408-29,799,703 | + | C1H2g11093 | CX2g024622 | LOC_Os02g53260 | Os02g0772300 | - | Detail |
| C2H2g06676 | 2:29,801,398-29,810,702 | + | C1H2g09184 | CX2g021573 | LOC_Os02g53270 | Os02g0772500 | - | Detail |
| C2H2g12559 | 2:29,811,401-29,814,054 | - | C1H2g18055 | CX2g020239 | LOC_Os02g53280 | Os02g0772600 | - | Detail |
| C2H2g06283 | 2:29,841,145-29,842,018 | + | C1H2g02313 | CX2g024470 | LOC_Os02g53320 | Os02g0773200 | - | Detail |
| C2H2g25592 | 2:29,842,460-29,845,916 | - | C1H2g08102 | CX2g019558 | LOC_Os02g53330 | Os02g0773300 | OsDCD1 | Detail |
| C2H2g27938 | 2:29,846,134-29,855,739 | + | C1H2g25749 | CX2g021420 | LOC_Os02g53340 | Os02g0773400 | OsCNGC12 | Detail |
| C2H2g00448 | 2:29,859,599-29,860,174 | - | - | CX2g023673 | LOC_Os02g53350 | Os02g0773500 | - | Detail |
| C2H2g08525 | 2:29,862,181-29,863,768 | - | C1H2g17806 | CX2g023373 | LOC_Os02g53360 | Os02g0773600 | - | Detail |
| C2H2g16066 | 2:29,866,636-29,869,536 | - | C1H2g25824 | CX2g019915 | LOC_Os02g53380 | Os02g0773732 | - | Detail |
| C2H2g17035 | 2:29,875,390-29,877,012 | + | - | - | - | - | - | Detail |
| C2H2g10384 | 2:29,877,537-29,877,848 | - | C1H2g01365 | CX2g024637 | LOC_Os02g53410 | Os02g0774200 | - | Detail |
| C2H2g07217 | 2:29,879,552-29,883,896 | - | C1H2g01399 | CX2g021368 | LOC_Os02g53420 | Os02g0774300 | - | Detail |
| C2H2g12161 | 2:29,885,350-29,887,351 | - | C1H2g13274 | CX2g019046 | LOC_Os02g53430 | Os02g0774500 | - | Detail |
| C2H2g22967 | 2:29,892,271-29,895,442 | + | C1H2g22474 | CX2g024874 | - | Os02g0774800 | - | Detail |
| C2H2g15356 | 2:29,912,155-29,912,346 | - | C1H2g06446 | - | - | - | - | Detail |
| C2H2g02849 | 2:29,912,812-29,914,976 | - | - | - | - | - | - | Detail |
| C2H2g06998 | 2:29,919,039-29,921,242 | + | C1H2g29192 | CX2g024255 | LOC_Os02g53490 | Os02g0775100 | MTP8.2 | Detail |
| C2H2g11710 | 2:29,921,454-29,925,875 | - | C1H2g06460 | CX2g020145 | LOC_Os02g53500 | Os02g0775200 | OsRFC3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034275 | 4:23,791,118-23,792,927 | + | C1H4g09912 | C2H4g02131 | LOC_Os04g46670 | Os04g0552400 | - | Detail |
| CX4g032133 | 4:23,796,829-23,797,758 | + | C1H4g09899 | C2H4g08222 | LOC_Os04g46680 | Os04g0552700 | - | Detail |
| CX4g032057 | 4:23,803,101-23,804,138 | + | C1H4g27612 | C2H4g05748 | LOC_Os04g46700 | Os04g0553000 | - | Detail |
| CX4g034044 | 4:23,812,589-23,814,196 | - | C1H4g10188 | C2H4g09046 | LOC_Os04g46730 | Os04g0553300 | - | Detail |
| CX4g032963 | 4:23,817,036-23,818,764 | - | C1H4g00564 | C2H4g10015 | LOC_Os04g46740 | Os04g0553500 | - | Detail |
| CX4g035719 | 4:23,821,773-23,822,003 | + | - | - | - | - | - | Detail |
| CX4g034448 | 4:23,825,187-23,829,526 | - | C1H4g08701 | C2H4g07798 | LOC_Os04g46750 | Os04g0553800 | - | Detail |
| CX4g032502 | 4:23,831,379-23,833,390 | - | C1H4g12111 | C2H4g20987 | LOC_Os04g46760 | Os04g0554000 | - | Detail |
| CX4g031950 | 4:23,835,846-23,838,793 | + | C1H4g05524 | C2H4g26256 | LOC_Os04g46780 | Os04g0554200 | - | Detail |
| CX4g033479 | 4:23,839,741-23,840,412 | - | - | C2H4g16654 | LOC_Os04g46790 | Os04g0554300 | - | Detail |
| CX4g032125 | 4:23,841,487-23,841,702 | - | - | - | - | - | - | Detail |
| CX4g033498 | 4:23,843,424-23,843,816 | + | C1H4g29756 | C2H4g08626 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| CX4g034369 | 4:23,853,711-23,854,124 | + | C1H4g22406 | C2H4g06180 | LOC_Os04g46830 | Os04g0554800 | - | Detail |
| CX4g035831 | 4:23,859,183-23,859,734 | - | C1H4g22897 | C2H4g00137 | LOC_Os04g46850 | Os04g0554900 | - | Detail |
| CX4g032521 | 4:23,866,448-23,868,571 | + | C1H4g08480 | C2H4g00621 | LOC_Os04g46860 | Os04g0555000 | OsHAM3 | Detail |
| CX4g034890 | 4:23,882,302-23,882,544 | - | - | - | - | - | - | Detail |
| CX4g033324 | 4:23,884,396-23,885,151 | - | - | - | - | - | - | Detail |
| CX4g032555 | 4:23,887,833-23,889,606 | - | C1H4g10618 | C2H4g19260 | LOC_Os04g46880 | Os04g0555300 | - | Detail |
| CX4g034039 | 4:23,895,675-23,899,367 | + | C1H4g20955 | C2H4g01436 | LOC_Os07g04850 | Os04g0555400 | - | Detail |
| CX4g033508 | 4:23,900,269-23,919,743 | - | C1H4g31360 | C2H4g27783 | LOC_Os04g46892 | Os04g0555500 | - | Detail |