| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27324 | 3:4,445,035-4,445,583 | - | C2H3g13886 | CX3g025308 | LOC_Os03g10040 | Os03g0196500 | - | Detail |
| C1H3g20653 | 3:4,455,482-4,457,756 | + | C2H2g00568 | CX3g026659 | LOC_Os03g45810 | - | - | Detail |
| C1H3g10497 | 3:4,457,781-4,459,090 | + | - | CX3g026948 | LOC_Os05g14410 | - | - | Detail |
| C1H3g14076 | 3:4,473,222-4,474,169 | - | C2H3g29891 | CX3g026778 | LOC_Os03g10050 | Os03g0196600 | OsSAT2;2 | Detail |
| C1H3g06895 | 3:4,479,200-4,482,464 | - | C2H3g16863 | CX3g029849 | LOC_Os03g10060 | Os03g0196800 | - | Detail |
| C1H3g04009 | 3:4,483,148-4,491,479 | - | C2H3g14483 | CX3g025984 | LOC_Os03g10070 | Os03g0196900 | - | Detail |
| C1H3g00549 | 3:4,498,743-4,499,846 | - | C2H3g11161 | - | - | - | - | Detail |
| C1H3g21235 | 3:4,503,757-4,506,215 | + | C2H3g28460 | CX3g028614 | LOC_Os03g10090 | Os03g0197100 | OsPLT1 | Detail |
| C1H3g24518 | 3:4,511,918-4,513,307 | - | - | - | - | - | - | Detail |
| C1H3g09951 | 3:4,521,130-4,522,791 | + | C2H3g26739 | CX3g026156 | LOC_Os03g10100 | Os03g0197200 | OsPLT7 | Detail |
| C1H3g27125 | 3:4,524,686-4,526,960 | + | C2H3g12097 | CX3g027610 | LOC_Os03g10110 | Os03g0197300 | FLOC2 | Detail |
| C1H3g04901 | 3:4,527,464-4,532,740 | - | C2H3g26065 | CX3g029675 | LOC_Os03g10120 | Os03g0197400 | - | Detail |
| C1H3g09335 | 3:4,544,309-4,547,229 | + | C2H3g03055 | CX3g026551 | LOC_Os03g10140 | Os03g0197800 | - | Detail |
| C1H3g02056 | 3:4,551,114-4,554,979 | + | C2H3g07572 | CX3g029127 | - | Os03g0103000 | - | Detail |
| C1H3g04546 | 3:4,564,396-4,565,226 | - | C2H3g06372 | CX3g028648 | LOC_Os03g10150 | Os03g0197900 | - | Detail |
| C1H3g20431 | 3:4,571,978-4,576,974 | + | C2H3g11749 | CX3g028444 | LOC_Os03g10180 | Os03g0198300 | - | Detail |
| C1H3g23421 | 3:4,579,006-4,583,930 | - | C2H3g04323 | CX3g026265 | LOC_Os03g08400 | - | - | Detail |
| C1H3g03137 | 3:4,592,036-4,597,720 | - | C2H3g13794 | CX3g025719 | LOC_Os03g08400 | Os04g0357300 | - | Detail |
| C1H3g27623 | 3:4,598,551-4,601,943 | + | C2H3g19159 | CX3g030601 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| C1H3g02850 | 3:4,607,914-4,610,236 | + | C2H3g09921 | CX3g031306 | LOC_Os03g10200 | Os03g0198500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034275 | 4:23,791,118-23,792,927 | + | C1H4g09912 | C2H4g02131 | LOC_Os04g46670 | Os04g0552400 | - | Detail |
| CX4g032133 | 4:23,796,829-23,797,758 | + | C1H4g09899 | C2H4g08222 | LOC_Os04g46680 | Os04g0552700 | - | Detail |
| CX4g032057 | 4:23,803,101-23,804,138 | + | C1H4g27612 | C2H4g05748 | LOC_Os04g46700 | Os04g0553000 | - | Detail |
| CX4g034044 | 4:23,812,589-23,814,196 | - | C1H4g10188 | C2H4g09046 | LOC_Os04g46730 | Os04g0553300 | - | Detail |
| CX4g032963 | 4:23,817,036-23,818,764 | - | C1H4g00564 | C2H4g10015 | LOC_Os04g46740 | Os04g0553500 | - | Detail |
| CX4g035719 | 4:23,821,773-23,822,003 | + | - | - | - | - | - | Detail |
| CX4g034448 | 4:23,825,187-23,829,526 | - | C1H4g08701 | C2H4g07798 | LOC_Os04g46750 | Os04g0553800 | - | Detail |
| CX4g032502 | 4:23,831,379-23,833,390 | - | C1H4g12111 | C2H4g20987 | LOC_Os04g46760 | Os04g0554000 | - | Detail |
| CX4g031950 | 4:23,835,846-23,838,793 | + | C1H4g05524 | C2H4g26256 | LOC_Os04g46780 | Os04g0554200 | - | Detail |
| CX4g033479 | 4:23,839,741-23,840,412 | - | - | C2H4g16654 | LOC_Os04g46790 | Os04g0554300 | - | Detail |
| CX4g032125 | 4:23,841,487-23,841,702 | - | - | - | - | - | - | Detail |
| CX4g033498 | 4:23,843,424-23,843,816 | + | C1H4g29756 | C2H4g08626 | LOC_Os04g46810 | Os04g0554500 | OsR3L1, OsHyPRP06/R3L1, OsHyPRP06 | Detail |
| CX4g034369 | 4:23,853,711-23,854,124 | + | C1H4g22406 | C2H4g06180 | LOC_Os04g46830 | Os04g0554800 | - | Detail |
| CX4g035831 | 4:23,859,183-23,859,734 | - | C1H4g22897 | C2H4g00137 | LOC_Os04g46850 | Os04g0554900 | - | Detail |
| CX4g032521 | 4:23,866,448-23,868,571 | + | C1H4g08480 | C2H4g00621 | LOC_Os04g46860 | Os04g0555000 | OsHAM3 | Detail |
| CX4g034890 | 4:23,882,302-23,882,544 | - | - | - | - | - | - | Detail |
| CX4g033324 | 4:23,884,396-23,885,151 | - | - | - | - | - | - | Detail |
| CX4g032555 | 4:23,887,833-23,889,606 | - | C1H4g10618 | C2H4g19260 | LOC_Os04g46880 | Os04g0555300 | - | Detail |
| CX4g034039 | 4:23,895,675-23,899,367 | + | C1H4g20955 | C2H4g01436 | LOC_Os07g04850 | Os04g0555400 | - | Detail |
| CX4g033508 | 4:23,900,269-23,919,743 | - | C1H4g31360 | C2H4g27783 | LOC_Os04g46892 | Os04g0555500 | - | Detail |