| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02733 | 1:884,535-889,937 | + | C1H1g26055 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C2H1g25728 | 1:894,155-897,038 | - | C1H1g13587 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g24887 | 1:905,925-909,298 | - | C1H1g19340 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C2H1g16133 | 1:911,678-914,437 | - | C1H1g28376 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C2H1g28060 | 1:918,001-920,692 | - | C1H1g06299 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C2H1g09306 | 1:929,892-933,650 | - | C1H1g29708 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C2H1g08550 | 1:940,072-940,593 | + | C1H1g13986 | - | - | - | - | Detail |
| C2H1g16398 | 1:943,043-943,377 | - | - | - | - | - | - | Detail |
| C2H1g12790 | 1:949,262-951,056 | - | C1H1g01366 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C2H1g11248 | 1:951,971-959,371 | - | C1H1g03260 | CX1g005069 | LOC_Os01g03020 | Os01g0120300 | - | Detail |
| C2H1g00360 | 1:959,862-962,390 | - | C1H1g11508 | CX1g001161 | LOC_Os01g03030 | Os01g0120400 | - | Detail |
| C2H1g23693 | 1:963,663-965,148 | - | C1H1g03575 | CX1g002228 | LOC_Os01g03040 | Os01g0120500 | - | Detail |
| C2H1g04453 | 1:966,291-968,290 | + | C1H1g25620 | CX1g000645 | LOC_Os01g03050 | Os01g0120600 | - | Detail |
| C2H1g02238 | 1:969,438-970,298 | - | - | CX1g004156 | LOC_Os01g03060 | Os01g0120700 | OsHRC | Detail |
| C2H1g07428 | 1:972,581-979,601 | - | C1H1g21397 | CX1g002673 | LOC_Os01g03070 | Os01g0120800 | - | Detail |
| C2H1g00585 | 1:982,117-982,722 | + | - | CX1g000024 | LOC_Os01g03080 | Os01g0121000 | - | Detail |
| C2H1g24271 | 1:984,465-987,582 | + | C1H1g11884 | CX1g003419 | LOC_Os01g03090 | Os01g0121100 | - | Detail |
| C2H1g00075 | 1:988,256-990,528 | - | C1H1g21163 | CX1g006351 | LOC_Os01g03100 | Os01g0121200 | - | Detail |
| C2H1g03352 | 1:998,181-1,003,121 | - | C1H1g02205 | CX1g000986 | LOC_Os01g03110 | Os01g0121300 | - | Detail |
| C2H1g22579 | 1:1,018,666-1,019,160 | - | C1H1g30654 | CX1g006139 | LOC_Os01g03130 | Os01g0121500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032343 | 4:23,657,013-23,657,867 | + | C1H4g01528 | C2H4g11718 | LOC_Os04g46400 | Os04g0549700 | OsAP2/ERF-40, OsTOC168 | Detail |
| CX4g034152 | 4:23,662,973-23,663,704 | + | C1H4g01528 | C2H4g26941 | LOC_Os04g46410 | Os04g0549800 | - | Detail |
| CX4g032904 | 4:23,682,351-23,683,004 | + | C1H4g01528 | C2H4g00089 | LOC_Os04g46440 | Os04g0550200 | OsERF34 | Detail |
| CX4g036146 | 4:23,687,470-23,687,817 | + | - | - | LOC_Os04g46444 | Os04g0550300 | - | Detail |
| CX4g034813 | 4:23,694,416-23,702,264 | - | C1H4g24190 | C2H4g27792 | LOC_Os04g46450 | Os04g0550400 | OsHUB1, HUB1 | Detail |
| CX4g032195 | 4:23,705,591-23,706,622 | + | - | C2H4g02409 | LOC_Os04g46460 | Os04g0550500 | - | Detail |
| CX4g034240 | 4:23,710,403-23,712,845 | + | C1H4g17634 | C2H4g04395 | LOC_Os04g46470 | Os04g0550600 | HTD1, OsCCD7, D17 | Detail |
| CX4g034920 | 4:23,713,375-23,715,267 | - | C1H4g11880 | C2H4g05787 | LOC_Os04g46480 | Os04g0550700 | - | Detail |
| CX4g034128 | 4:23,718,369-23,719,360 | - | C1H4g31862 | C2H4g01885 | LOC_Os04g46490 | Os04g0550800 | - | Detail |
| CX4g034482 | 4:23,719,830-23,720,761 | - | C1H4g15457 | C2H4g17694 | LOC_Os04g46530 | Os04g0550900 | - | Detail |
| CX4g032983 | 4:23,721,445-23,721,694 | + | C1H11g16302 | C2H11g04601 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g034419 | 4:23,725,403-23,728,195 | + | C1H4g10662 | C2H4g01769 | LOC_Os04g46560 | Os04g0551200 | OsMDH4.1 | Detail |
| CX4g035452 | 4:23,729,159-23,732,518 | - | C1H4g21894 | C2H4g03635 | LOC_Os04g46570 | Os04g0551300 | - | Detail |
| CX4g033814 | 4:23,735,223-23,738,357 | + | C1H4g10694 | C2H4g26920 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| CX4g035858 | 4:23,747,858-23,748,387 | - | C1H4g09580 | C2H4g09338 | LOC_Os04g46600 | Os04g0551600 | - | Detail |
| CX4g031773 | 4:23,757,935-23,759,603 | - | C1H4g14375 | C2H4g30490 | LOC_Os04g46610 | Os04g0551700 | - | Detail |
| CX4g033583 | 4:23,759,808-23,765,294 | + | C1H4g18975 | C2H4g18666 | LOC_Os04g46620 | Os04g0551800 | - | Detail |
| CX4g034498 | 4:23,767,906-23,769,142 | + | C1H4g05752 | C2H4g22887 | LOC_Os04g46630 | Os04g0552000 | - | Detail |
| CX4g036147 | 4:23,773,073-23,774,177 | + | C1H4g21482 | C2H4g20285 | LOC_Os04g46650 | Os04g0552200 | OsEXPB5 | Detail |
| CX4g035842 | 4:23,781,413-23,781,859 | + | C1H4g09010 | C2H4g12502 | LOC_Os04g46660 | Os04g0552300 | - | Detail |