| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g09266 | 3:4,904,852-4,911,840 | + | C2H3g01278 | CX3g028760 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| C1H3g14529 | 3:4,913,544-4,918,530 | + | C2H3g28949 | CX3g029451 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| C1H3g24511 | 3:4,926,401-4,931,763 | + | C2H3g29987 | CX3g026705 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| C1H3g03568 | 3:4,936,763-4,938,229 | - | C2H3g05398 | CX3g029670 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |
| C1H3g13621 | 3:4,944,752-4,960,655 | - | C2H3g12127 | CX3g029010 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| C1H3g08320 | 3:4,965,861-4,966,886 | - | C2H3g24955 | CX3g025706 | - | Os03g0206201 | - | Detail |
| C1H3g31074 | 3:4,967,476-4,970,809 | - | - | - | - | - | - | Detail |
| C1H3g09000 | 3:4,977,714-4,978,093 | - | C2H3g09566 | CX3g025152 | LOC_Os03g10860 | Os03g0206400 | - | Detail |
| C1H3g23004 | 3:4,983,859-4,986,330 | + | C2H3g30671 | CX3g025216 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| C1H3g06410 | 3:4,987,578-4,990,347 | - | C2H3g08057 | CX3g028250 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| C1H3g27718 | 3:4,991,983-4,994,469 | + | C2H3g20915 | CX3g028910 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| C1H3g00893 | 3:5,011,803-5,014,766 | - | C2H3g10611 | CX3g026802 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| C1H3g01133 | 3:5,015,624-5,017,577 | - | C2H3g21091 | CX3g025332 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| C1H3g28849 | 3:5,018,053-5,022,776 | - | C2H3g16402 | CX3g026481 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| C1H3g06136 | 3:5,031,090-5,032,849 | + | C2H3g22551 | CX3g026300 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| C1H3g30385 | 3:5,036,888-5,039,139 | + | C2H3g27737 | CX3g028734 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| C1H3g09911 | 3:5,041,620-5,045,541 | - | C2H3g03380 | CX3g029045 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| C1H3g06609 | 3:5,046,661-5,050,805 | - | C2H3g00163 | CX3g026306 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| C1H3g30012 | 3:5,065,565-5,067,157 | + | C2H3g10069 | CX3g026296 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| C1H3g13525 | 3:5,069,353-5,072,403 | + | C2H3g05594 | CX3g026122 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032343 | 4:23,657,013-23,657,867 | + | C1H4g01528 | C2H4g11718 | LOC_Os04g46400 | Os04g0549700 | OsAP2/ERF-40, OsTOC168 | Detail |
| CX4g034152 | 4:23,662,973-23,663,704 | + | C1H4g01528 | C2H4g26941 | LOC_Os04g46410 | Os04g0549800 | - | Detail |
| CX4g032904 | 4:23,682,351-23,683,004 | + | C1H4g01528 | C2H4g00089 | LOC_Os04g46440 | Os04g0550200 | OsERF34 | Detail |
| CX4g036146 | 4:23,687,470-23,687,817 | + | - | - | LOC_Os04g46444 | Os04g0550300 | - | Detail |
| CX4g034813 | 4:23,694,416-23,702,264 | - | C1H4g24190 | C2H4g27792 | LOC_Os04g46450 | Os04g0550400 | OsHUB1, HUB1 | Detail |
| CX4g032195 | 4:23,705,591-23,706,622 | + | - | C2H4g02409 | LOC_Os04g46460 | Os04g0550500 | - | Detail |
| CX4g034240 | 4:23,710,403-23,712,845 | + | C1H4g17634 | C2H4g04395 | LOC_Os04g46470 | Os04g0550600 | HTD1, OsCCD7, D17 | Detail |
| CX4g034920 | 4:23,713,375-23,715,267 | - | C1H4g11880 | C2H4g05787 | LOC_Os04g46480 | Os04g0550700 | - | Detail |
| CX4g034128 | 4:23,718,369-23,719,360 | - | C1H4g31862 | C2H4g01885 | LOC_Os04g46490 | Os04g0550800 | - | Detail |
| CX4g034482 | 4:23,719,830-23,720,761 | - | C1H4g15457 | C2H4g17694 | LOC_Os04g46530 | Os04g0550900 | - | Detail |
| CX4g032983 | 4:23,721,445-23,721,694 | + | C1H11g16302 | C2H11g04601 | LOC_Os04g53050 | Os04g0621700 | PiPR1 | Detail |
| CX4g034419 | 4:23,725,403-23,728,195 | + | C1H4g10662 | C2H4g01769 | LOC_Os04g46560 | Os04g0551200 | OsMDH4.1 | Detail |
| CX4g035452 | 4:23,729,159-23,732,518 | - | C1H4g21894 | C2H4g03635 | LOC_Os04g46570 | Os04g0551300 | - | Detail |
| CX4g033814 | 4:23,735,223-23,738,357 | + | C1H4g10694 | C2H4g26920 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| CX4g035858 | 4:23,747,858-23,748,387 | - | C1H4g09580 | C2H4g09338 | LOC_Os04g46600 | Os04g0551600 | - | Detail |
| CX4g031773 | 4:23,757,935-23,759,603 | - | C1H4g14375 | C2H4g30490 | LOC_Os04g46610 | Os04g0551700 | - | Detail |
| CX4g033583 | 4:23,759,808-23,765,294 | + | C1H4g18975 | C2H4g18666 | LOC_Os04g46620 | Os04g0551800 | - | Detail |
| CX4g034498 | 4:23,767,906-23,769,142 | + | C1H4g05752 | C2H4g22887 | LOC_Os04g46630 | Os04g0552000 | - | Detail |
| CX4g036147 | 4:23,773,073-23,774,177 | + | C1H4g21482 | C2H4g20285 | LOC_Os04g46650 | Os04g0552200 | OsEXPB5 | Detail |
| CX4g035842 | 4:23,781,413-23,781,859 | + | C1H4g09010 | C2H4g12502 | LOC_Os04g46660 | Os04g0552300 | - | Detail |