| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09631 | 9:8,006,927-8,008,614 | + | C1H9g27205 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C2H9g08878 | 9:8,010,192-8,011,081 | - | C1H9g31109 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C2H9g24688 | 9:8,014,892-8,016,244 | - | C1H9g09285 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C2H9g12132 | 9:8,016,328-8,018,221 | - | - | - | - | - | - | Detail |
| C2H9g24003 | 9:8,020,742-8,023,525 | - | C1H9g17537 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C2H9g25380 | 9:8,024,096-8,032,549 | - | C1H9g24231 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C2H9g13951 | 9:8,049,916-8,053,048 | + | C1H9g01463 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C2H9g17262 | 9:8,056,980-8,059,451 | + | - | CX9g056621 | - | - | - | Detail |
| C2H9g15972 | 9:8,059,488-8,059,682 | - | - | - | LOC_Os09g15680 | Os09g0325800 | - | Detail |
| C2H9g24883 | 9:8,062,332-8,063,402 | - | C1H9g06365 | CX9g056384 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| C2H9g29577 | 9:8,063,432-8,063,764 | + | - | - | - | - | - | Detail |
| C2H9g09634 | 9:8,077,352-8,078,828 | + | C1H9g31373 | CX9g057751 | - | - | - | Detail |
| C2H9g19536 | 9:8,083,013-8,085,577 | + | C1H9g12543 | CX9g057751 | LOC_Os09g14660 | Os09g0325000 | - | Detail |
| C2H9g17279 | 9:8,088,916-8,089,320 | - | - | - | - | - | - | Detail |
| C2H9g14451 | 9:8,095,275-8,096,567 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15560 | Os09g0324400 | - | Detail |
| C2H9g15142 | 9:8,099,495-8,100,904 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15550 | Os09g0324300 | - | Detail |
| C2H9g08875 | 9:8,101,999-8,103,324 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15540 | Os09g0324200 | - | Detail |
| C2H9g12849 | 9:8,105,486-8,105,962 | - | - | CX9g057572 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| C2H9g30451 | 9:8,113,176-8,114,257 | + | C1H9g26563 | CX9g055980 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| C2H9g24164 | 9:8,120,999-8,122,070 | - | C1H9g26563 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034379 | 4:23,514,604-23,517,450 | + | C1H4g03988 | C2H4g11468 | LOC_Os04g46190 | Os04g0546400 | - | Detail |
| CX4g032913 | 4:23,519,247-23,519,633 | + | - | - | - | - | - | Detail |
| CX4g033590 | 4:23,524,182-23,525,096 | - | C1H4g07196 | C2H4g09322 | LOC_Os04g46220 | Os04g0546800 | OsERF1 | Detail |
| CX4g032432 | 4:23,548,171-23,549,127 | + | C1H4g01528 | C2H4g06793 | LOC_Os04g46240 | Os04g0547600 | - | Detail |
| CX4g032621 | 4:23,556,282-23,557,271 | + | C1H4g01528 | C2H4g06793 | LOC_Os04g46250 | Os04g0547600 | - | Detail |
| CX4g036174 | 4:23,565,438-23,565,794 | - | - | C2H4g07090 | LOC_Os01g45970 | Os01g0647800 | - | Detail |
| CX4g034183 | 4:23,569,760-23,571,842 | + | C1H4g12670 | C2H4g18179 | LOC_Os04g46280 | Os04g0547900 | - | Detail |
| CX4g033458 | 4:23,572,918-23,575,620 | + | C1H4g10052 | C2H4g14899 | LOC_Os04g46290 | Os04g0548000 | - | Detail |
| CX4g031368 | 4:23,588,035-23,588,331 | + | - | C2H4g03445 | - | - | - | Detail |
| CX4g036152 | 4:23,588,735-23,591,086 | - | C1H4g13563 | C2H4g08504 | LOC_Os04g46300 | Os04g0286900 | - | Detail |
| CX4g035683 | 4:23,593,254-23,608,036 | + | C1H4g04798 | C2H4g03565 | LOC_Os04g46310 | Os04g0548300 | - | Detail |
| CX4g033574 | 4:23,608,724-23,608,894 | - | - | - | - | - | - | Detail |
| CX4g032840 | 4:23,610,154-23,612,496 | - | C1H4g12131 | C2H4g11033 | LOC_Os04g46320 | Os04g0548400 | - | Detail |
| CX4g032635 | 4:23,615,720-23,616,964 | - | C1H2g19219 | C2H4g30491 | LOC_Os04g46330 | Os04g0548500 | - | Detail |
| CX4g034670 | 4:23,624,056-23,625,267 | - | C1H4g26382 | C2H4g19703 | LOC_Os04g46350 | Os04g0548700 | - | Detail |
| CX4g034019 | 4:23,633,313-23,633,501 | - | - | - | - | - | - | Detail |
| CX4g032819 | 4:23,635,711-23,639,140 | - | C1H4g18543 | C2H4g12477 | LOC_Os04g46370 | Os04g0549300 | - | Detail |
| CX4g034583 | 4:23,638,787-23,639,746 | + | C1H4g06939 | C2H4g23802 | LOC_Os04g46380 | Os04g0549400 | - | Detail |
| CX4g033131 | 4:23,643,125-23,644,987 | + | C1H4g13580 | C2H4g16012 | LOC_Os04g46384 | Os04g0549500 | Os2R_MYB49 | Detail |
| CX4g031909 | 4:23,646,650-23,649,943 | + | C1H4g09321 | C2H4g10744 | LOC_Os04g46390 | Os04g0549600 | - | Detail |