| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g033722 | 4:23,384,500-23,385,132 | + | C1H4g29842 | C2H4g28036 | LOC_Os04g45940 | Os04g0543500 | - | Detail |
| CX4g033912 | 4:23,388,335-23,391,709 | - | C1H4g23068 | C2H4g07566 | LOC_Os04g45950 | Os04g0543600 | - | Detail |
| CX4g032899 | 4:23,395,202-23,399,329 | + | C1H4g25515 | C2H4g23324 | LOC_Os04g45960 | Os04g0543700 | OsMSP | Detail |
| CX4g035856 | 4:23,406,124-23,410,044 | + | C1H4g25512 | C2H4g27717 | LOC_Os04g45970 | Os04g0543900 | - | Detail |
| CX4g032582 | 4:23,415,431-23,415,880 | + | - | C2H4g03252 | LOC_Os04g45980 | Os04g0544000 | - | Detail |
| CX4g031976 | 4:23,418,351-23,420,879 | - | C1H4g13260 | C2H4g24460 | LOC_Os04g45990 | Os04g0544100 | SDG703 | Detail |
| CX4g031985 | 4:23,426,352-23,428,284 | - | C1H4g05097 | C2H4g09721 | LOC_Os04g46000 | Os04g0544200 | OsCYCP4;4 | Detail |
| CX4g036665 | 4:23,430,696-23,433,057 | - | C1H4g03288 | C2H4g14132 | LOC_Os04g46010 | Os04g0544400 | - | Detail |
| CX4g032526 | 4:23,434,855-23,437,188 | - | C1H4g26782 | C2H4g05003 | LOC_Os04g46020 | Os04g0544500 | - | Detail |
| CX4g034792 | 4:23,449,300-23,455,739 | - | C1H4g29118 | C2H4g02497 | LOC_Os04g46050 | Os04g0544900 | - | Detail |
| CX4g035537 | 4:23,457,051-23,463,316 | - | C1H4g29571 | C2H4g20583 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| CX4g032824 | 4:23,474,032-23,476,783 | - | C1H4g12807 | C2H4g10919 | LOC_Os04g46079 | Os04g0545100 | - | Detail |
| CX4g033135 | 4:23,478,754-23,483,327 | - | C1H4g02430 | C2H4g28241 | LOC_Os04g46100 | Os04g0545200 | - | Detail |
| CX4g031916 | 4:23,486,410-23,487,312 | - | C1H4g01759 | C2H4g05551 | LOC_Os04g46110 | Os04g0545300 | - | Detail |
| CX4g035260 | 4:23,488,584-23,489,259 | - | C1H4g22242 | C2H4g23072 | LOC_Os04g46120 | Os04g0545400 | - | Detail |
| CX4g036612 | 4:23,491,181-23,492,071 | - | C1H4g03888 | C2H4g24037 | LOC_Os04g46130 | Os04g0545600 | - | Detail |
| CX4g035305 | 4:23,493,841-23,495,137 | - | C1H4g21193 | C2H4g23805 | LOC_Os04g46140 | Os04g0545700 | - | Detail |
| CX4g035243 | 4:23,498,848-23,499,580 | - | C1H4g21864 | C2H4g15752 | LOC_Os04g46160 | - | - | Detail |
| CX4g032110 | 4:23,501,479-23,502,699 | + | - | C2H4g25751 | LOC_Os04g46170 | Os04g0546100 | - | Detail |
| CX4g033618 | 4:23,510,435-23,513,148 | + | C1H4g23759 | C2H4g17081 | LOC_Os04g46180 | Os04g0546300 | OsAGC11 | Detail |