| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01214 | 3:6,769,754-6,770,925 | - | C1H3g27152 | CX3g027348 | LOC_Os03g14140 | Os03g0245300 | - | Detail |
| C2H3g21217 | 3:6,772,582-6,773,526 | - | C1H3g23422 | CX3g029867 | LOC_Os03g14150 | Os03g0245500 | GAPLESS2 | Detail |
| C2H3g18121 | 3:6,777,754-6,779,352 | - | C1H3g12594 | CX3g028205 | LOC_Os03g14170 | Os03g0245700 | - | Detail |
| C2H3g16810 | 3:6,790,506-6,790,716 | + | C1H3g14869 | - | - | - | - | Detail |
| C2H3g01805 | 3:6,792,065-6,793,206 | + | C1H3g26151 | CX3g031193 | LOC_Os03g14180 | Os03g0245800 | OsHSP26, OsHSP26.7 | Detail |
| C2H3g04163 | 3:6,793,332-6,794,431 | - | C1H3g11403 | CX3g028262 | LOC_Os03g14190 | Os03g0286500 | - | Detail |
| C2H3g26968 | 3:6,799,289-6,801,987 | - | C1H3g05479 | CX3g027333 | LOC_Os03g14210 | Os03g0246100 | - | Detail |
| C2H3g26368 | 3:6,825,102-6,833,389 | + | C1H3g24069 | CX3g025246 | LOC_Os03g14250 | Os03g0246500 | - | Detail |
| C2H3g20168 | 3:6,837,652-6,846,755 | - | C1H3g04621 | CX3g031009 | LOC_Os03g14260 | Os03g0246800 | - | Detail |
| C2H3g04669 | 3:6,849,978-6,851,611 | - | C1H3g17875 | CX3g031259 | LOC_Os03g14270 | Os03g0246900 | - | Detail |
| C2H3g12251 | 3:6,857,619-6,863,304 | - | C1H3g11721 | CX3g024987 | LOC_Os03g14280 | Os03g0247000 | - | Detail |
| C2H3g19476 | 3:6,868,281-6,870,233 | + | C1H3g04193 | CX3g025549 | LOC_Os03g14290 | Os03g0247100 | - | Detail |
| C2H3g06079 | 3:6,874,638-6,875,075 | + | C1H3g02634 | CX3g029027 | LOC_Os03g14300 | Os03g0247200 | - | Detail |
| C2H3g03215 | 3:6,877,198-6,878,577 | + | C1H3g20245 | CX3g027071 | LOC_Os03g14310 | Os03g0247300 | Sc, Sc-j | Detail |
| C2H3g12027 | 3:6,877,315-6,877,620 | - | - | - | - | - | - | Detail |
| C2H3g22875 | 3:6,881,168-6,881,431 | + | C1H3g23753 | - | LOC_Os03g14320 | Os03g0247400 | - | Detail |
| C2H3g16307 | 3:6,884,881-6,886,044 | + | C1H3g27748 | CX3g029027 | LOC_Os03g14334 | Os03g0247600 | - | Detail |
| C2H3g17890 | 3:6,887,065-6,887,328 | + | C1H3g31201 | CX3g027944 | - | Os03g0247750 | - | Detail |
| C2H3g21682 | 3:6,892,691-6,895,580 | + | C1H3g19658 | CX3g030912 | LOC_Os03g14370 | Os03g0247900 | OsACR9 | Detail |
| C2H3g29476 | 3:6,898,037-6,905,507 | - | C1H3g14669 | CX3g029315 | LOC_Os03g14380 | Os03g0248000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035647 | 4:23,203,326-23,205,100 | - | C1H4g17088 | C2H4g19707 | LOC_Os04g45630 | Os04g0539300 | - | Detail |
| CX4g033248 | 4:23,213,932-23,215,568 | + | C1H4g04536 | C2H4g18724 | LOC_Os04g45650 | Os04g0539500 | - | Detail |
| CX4g034908 | 4:23,219,777-23,220,069 | - | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX4g035492 | 4:23,225,549-23,229,760 | - | C1H4g13934 | C2H4g04312 | LOC_Os04g45670 | Os04g0539800 | - | Detail |
| CX4g031384 | 4:23,237,820-23,239,532 | + | C1H4g18759 | C2H4g29647 | LOC_Os04g45690 | Os04g0540200 | OsRIP1 | Detail |
| CX4g033676 | 4:23,243,174-23,245,350 | + | C1H4g30808 | C2H4g20715 | LOC_Os04g45700 | Os04g0540300 | - | Detail |
| CX4g033064 | 4:23,246,094-23,250,368 | - | C1H4g25127 | C2H4g10305 | LOC_Os04g45720 | Os04g0540600 | - | Detail |
| CX4g036212 | 4:23,255,428-23,256,620 | - | C1H4g14597 | C2H4g09606 | LOC_Os04g45730 | Os04g0540900 | STRK1 | Detail |
| CX4g035032 | 4:23,276,309-23,279,572 | - | C1H4g08827 | C2H4g10705 | LOC_Os04g45750 | Os04g0541100 | - | Detail |
| CX4g034596 | 4:23,277,508-23,278,158 | + | - | - | - | Os04g0541234 | - | Detail |
| CX4g036159 | 4:23,296,584-23,296,772 | - | - | C2H4g02427 | - | - | - | Detail |
| CX4g033606 | 4:23,301,672-23,306,798 | + | C1H4g08954 | C2H4g12357 | LOC_Os04g45800 | Os04g0541500 | OsLCBK2 | Detail |
| CX4g034688 | 4:23,310,402-23,311,386 | + | C1H4g13532 | C2H4g17090 | LOC_Os04g45810 | Os04g0541700 | HOX22, Oshox22, OsHox22 | Detail |
| CX4g031805 | 4:23,320,653-23,323,040 | + | C1H4g31215 | C2H4g16789 | LOC_Os04g45821 | Os04g0541900 | - | Detail |
| CX4g032986 | 4:23,325,170-23,325,799 | + | - | C2H4g20318 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| CX4g036589 | 4:23,332,725-23,336,193 | - | C1H4g01207 | C2H4g15215 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| CX4g034574 | 4:23,347,399-23,350,475 | - | C1H4g26797 | C2H4g05921 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| CX4g031872 | 4:23,355,360-23,358,686 | + | C1H4g00917 | C2H4g03772 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| CX4g033127 | 4:23,358,993-23,360,615 | - | C1H4g12022 | C2H4g18044 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| CX4g031771 | 4:23,374,335-23,378,043 | + | C1H4g12009 | C2H4g06135 | LOC_Os04g45930 | Os04g0543200 | - | Detail |