| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13326 | 2:3,588,053-3,590,715 | - | C1H2g08053 | CX2g020425 | LOC_Os02g07920 | Os02g0175900 | - | Detail |
| C2H2g22576 | 2:3,592,545-3,592,920 | - | - | - | - | - | - | Detail |
| C2H2g12429 | 2:3,596,184-3,596,852 | - | C1H2g09013 | CX2g024012 | LOC_Os02g07930 | Os02g0176000 | - | Detail |
| C2H2g10282 | 2:3,613,439-3,623,803 | - | C1H2g28078 | CX2g024713 | LOC_Os02g07960 | Os02g0176100 | - | Detail |
| C2H2g27167 | 2:3,638,922-3,640,311 | - | C1H2g25304 | CX2g023070 | LOC_Os02g07980 | Os02g0176400 | - | Detail |
| C2H2g16155 | 2:3,651,851-3,665,134 | - | C1H2g10513 | CX2g023980 | LOC_Os02g08010 | Os02g0176700 | OsACA9 | Detail |
| C2H2g12184 | 2:3,672,081-3,672,663 | - | - | - | - | - | - | Detail |
| C2H2g22723 | 2:3,680,501-3,683,234 | - | C1H2g25148 | CX2g022339 | LOC_Os02g08030 | Os02g0176900 | - | Detail |
| C2H2g01390 | 2:3,700,208-3,703,788 | + | C1H2g16100 | CX2g022848 | LOC_Os02g08070 | Os02g0177300 | - | Detail |
| C2H2g10970 | 2:3,712,383-3,716,534 | - | C1H2g15920 | CX2g024774 | LOC_Os02g08080 | Os02g0177400 | - | Detail |
| C2H2g24704 | 2:3,717,510-3,720,546 | - | C1H2g27198 | CX2g020793 | LOC_Os02g08090 | Os02g0177500 | - | Detail |
| C2H2g12631 | 2:3,726,595-3,731,994 | + | C1H2g08951 | CX2g022957 | LOC_Os02g08100 | Os02g0177600 | 4CL3, Os4CL3 | Detail |
| C2H2g27738 | 2:3,733,013-3,734,807 | - | C1H2g09011 | CX2g022286 | LOC_Os02g08110 | Os02g0177700 | - | Detail |
| C2H2g12927 | 2:3,743,297-3,749,181 | - | C1H2g27287 | CX2g022124 | LOC_Os02g08120 | Os02g0177800 | - | Detail |
| C2H2g07746 | 2:3,752,307-3,757,112 | + | C1H2g28459 | CX2g019995 | LOC_Os02g08130 | Os02g0177900 | - | Detail |
| C2H2g14463 | 2:3,757,065-3,760,131 | - | C1H2g30647 | CX2g024854 | LOC_Os02g08140 | Os02g0178000 | - | Detail |
| C2H2g17770 | 2:3,765,081-3,766,445 | + | C1H2g28373 | CX2g023396 | LOC_Os02g08150 | Os02g0178100 | - | Detail |
| C2H2g04824 | 2:3,768,438-3,772,203 | + | C1H2g21750 | CX2g020766 | LOC_Os02g08160 | Os02g0178200 | - | Detail |
| C2H2g23387 | 2:3,780,280-3,782,362 | + | C1H2g28628 | CX2g023441 | LOC_Os02g08180 | Os02g0178400 | - | Detail |
| C2H2g26582 | 2:3,782,576-3,786,188 | - | C1H2g01304 | CX2g023345 | LOC_Os02g08190 | Os02g0178500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035647 | 4:23,203,326-23,205,100 | - | C1H4g17088 | C2H4g19707 | LOC_Os04g45630 | Os04g0539300 | - | Detail |
| CX4g033248 | 4:23,213,932-23,215,568 | + | C1H4g04536 | C2H4g18724 | LOC_Os04g45650 | Os04g0539500 | - | Detail |
| CX4g034908 | 4:23,219,777-23,220,069 | - | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX4g035492 | 4:23,225,549-23,229,760 | - | C1H4g13934 | C2H4g04312 | LOC_Os04g45670 | Os04g0539800 | - | Detail |
| CX4g031384 | 4:23,237,820-23,239,532 | + | C1H4g18759 | C2H4g29647 | LOC_Os04g45690 | Os04g0540200 | OsRIP1 | Detail |
| CX4g033676 | 4:23,243,174-23,245,350 | + | C1H4g30808 | C2H4g20715 | LOC_Os04g45700 | Os04g0540300 | - | Detail |
| CX4g033064 | 4:23,246,094-23,250,368 | - | C1H4g25127 | C2H4g10305 | LOC_Os04g45720 | Os04g0540600 | - | Detail |
| CX4g036212 | 4:23,255,428-23,256,620 | - | C1H4g14597 | C2H4g09606 | LOC_Os04g45730 | Os04g0540900 | STRK1 | Detail |
| CX4g035032 | 4:23,276,309-23,279,572 | - | C1H4g08827 | C2H4g10705 | LOC_Os04g45750 | Os04g0541100 | - | Detail |
| CX4g034596 | 4:23,277,508-23,278,158 | + | - | - | - | Os04g0541234 | - | Detail |
| CX4g036159 | 4:23,296,584-23,296,772 | - | - | C2H4g02427 | - | - | - | Detail |
| CX4g033606 | 4:23,301,672-23,306,798 | + | C1H4g08954 | C2H4g12357 | LOC_Os04g45800 | Os04g0541500 | OsLCBK2 | Detail |
| CX4g034688 | 4:23,310,402-23,311,386 | + | C1H4g13532 | C2H4g17090 | LOC_Os04g45810 | Os04g0541700 | HOX22, Oshox22, OsHox22 | Detail |
| CX4g031805 | 4:23,320,653-23,323,040 | + | C1H4g31215 | C2H4g16789 | LOC_Os04g45821 | Os04g0541900 | - | Detail |
| CX4g032986 | 4:23,325,170-23,325,799 | + | - | C2H4g20318 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| CX4g036589 | 4:23,332,725-23,336,193 | - | C1H4g01207 | C2H4g15215 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| CX4g034574 | 4:23,347,399-23,350,475 | - | C1H4g26797 | C2H4g05921 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| CX4g031872 | 4:23,355,360-23,358,686 | + | C1H4g00917 | C2H4g03772 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| CX4g033127 | 4:23,358,993-23,360,615 | - | C1H4g12022 | C2H4g18044 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| CX4g031771 | 4:23,374,335-23,378,043 | + | C1H4g12009 | C2H4g06135 | LOC_Os04g45930 | Os04g0543200 | - | Detail |