| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g02885 | 4:23,967,672-23,967,923 | + | - | - | - | Os04g0550866 | - | Detail |
| C1H4g10662 | 4:23,970,864-23,973,522 | + | C2H4g01769 | CX4g034419 | LOC_Os04g46560 | Os04g0551200 | OsMDH4.1 | Detail |
| C1H4g21894 | 4:23,974,487-23,978,062 | - | C2H4g03635 | CX4g035452 | LOC_Os04g46570 | Os04g0551300 | - | Detail |
| C1H4g11689 | 4:23,980,497-23,981,263 | + | C2H4g26920 | CX4g033814 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| C1H4g10694 | 4:23,985,172-23,985,663 | + | C2H4g26920 | CX4g033814 | LOC_Os04g46580 | Os04g0551500 | - | Detail |
| C1H4g09580 | 4:23,995,313-23,995,842 | - | C2H4g09338 | CX4g035858 | LOC_Os04g46600 | Os04g0551600 | - | Detail |
| C1H4g14375 | 4:24,005,591-24,007,493 | - | C2H4g30490 | CX4g031773 | LOC_Os04g46610 | Os04g0551700 | - | Detail |
| C1H4g18975 | 4:24,007,375-24,013,262 | + | C2H4g18666 | CX4g033583 | LOC_Os04g46620 | Os04g0551800 | - | Detail |
| C1H4g05752 | 4:24,015,150-24,016,386 | + | C2H4g22887 | CX4g034498 | LOC_Os04g46630 | Os04g0552000 | - | Detail |
| C1H4g21482 | 4:24,021,071-24,022,175 | + | C2H4g20285 | CX4g036147 | LOC_Os04g46650 | Os04g0552200 | OsEXPB5 | Detail |
| C1H4g09010 | 4:24,029,710-24,030,363 | + | C2H4g12502 | CX4g035842 | LOC_Os04g46660 | Os04g0552300 | - | Detail |
| C1H4g09912 | 4:24,034,776-24,036,600 | + | C2H4g02131 | CX4g034275 | LOC_Os04g46670 | Os04g0552400 | - | Detail |
| C1H4g09899 | 4:24,040,499-24,041,428 | + | C2H4g08222 | CX4g032133 | LOC_Os04g46680 | Os04g0552700 | - | Detail |
| C1H4g27612 | 4:24,046,725-24,047,756 | + | C2H4g05748 | CX4g032057 | LOC_Os04g46700 | Os04g0553000 | - | Detail |
| C1H4g04371 | 4:24,050,238-24,052,003 | - | C2H4g04018 | CX4g034044 | LOC_Os04g46710 | Os04g0553300 | - | Detail |
| C1H4g09240 | 4:24,054,282-24,054,488 | - | - | - | - | - | - | Detail |
| C1H4g10188 | 4:24,056,244-24,057,851 | - | C2H4g09046 | CX4g034044 | LOC_Os04g46730 | Os04g0553300 | - | Detail |
| C1H4g00564 | 4:24,060,765-24,062,955 | - | C2H4g10015 | CX4g032963 | LOC_Os04g46740 | Os04g0553650 | - | Detail |
| C1H4g08701 | 4:24,068,790-24,073,884 | - | C2H4g07798 | CX4g034448 | LOC_Os04g46750 | Os04g0553800 | - | Detail |
| C1H4g12111 | 4:24,075,505-24,077,416 | - | C2H4g20987 | CX4g032502 | LOC_Os04g46760 | Os04g0554000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035647 | 4:23,203,326-23,205,100 | - | C1H4g17088 | C2H4g19707 | LOC_Os04g45630 | Os04g0539300 | - | Detail |
| CX4g033248 | 4:23,213,932-23,215,568 | + | C1H4g04536 | C2H4g18724 | LOC_Os04g45650 | Os04g0539500 | - | Detail |
| CX4g034908 | 4:23,219,777-23,220,069 | - | C1H7g27141 | C2H4g24787 | - | - | - | Detail |
| CX4g035492 | 4:23,225,549-23,229,760 | - | C1H4g13934 | C2H4g04312 | LOC_Os04g45670 | Os04g0539800 | - | Detail |
| CX4g031384 | 4:23,237,820-23,239,532 | + | C1H4g18759 | C2H4g29647 | LOC_Os04g45690 | Os04g0540200 | OsRIP1 | Detail |
| CX4g033676 | 4:23,243,174-23,245,350 | + | C1H4g30808 | C2H4g20715 | LOC_Os04g45700 | Os04g0540300 | - | Detail |
| CX4g033064 | 4:23,246,094-23,250,368 | - | C1H4g25127 | C2H4g10305 | LOC_Os04g45720 | Os04g0540600 | - | Detail |
| CX4g036212 | 4:23,255,428-23,256,620 | - | C1H4g14597 | C2H4g09606 | LOC_Os04g45730 | Os04g0540900 | STRK1 | Detail |
| CX4g035032 | 4:23,276,309-23,279,572 | - | C1H4g08827 | C2H4g10705 | LOC_Os04g45750 | Os04g0541100 | - | Detail |
| CX4g034596 | 4:23,277,508-23,278,158 | + | - | - | - | Os04g0541234 | - | Detail |
| CX4g036159 | 4:23,296,584-23,296,772 | - | - | C2H4g02427 | - | - | - | Detail |
| CX4g033606 | 4:23,301,672-23,306,798 | + | C1H4g08954 | C2H4g12357 | LOC_Os04g45800 | Os04g0541500 | OsLCBK2 | Detail |
| CX4g034688 | 4:23,310,402-23,311,386 | + | C1H4g13532 | C2H4g17090 | LOC_Os04g45810 | Os04g0541700 | HOX22, Oshox22, OsHox22 | Detail |
| CX4g031805 | 4:23,320,653-23,323,040 | + | C1H4g31215 | C2H4g16789 | LOC_Os04g45821 | Os04g0541900 | - | Detail |
| CX4g032986 | 4:23,325,170-23,325,799 | + | - | C2H4g20318 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| CX4g036589 | 4:23,332,725-23,336,193 | - | C1H4g01207 | C2H4g15215 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| CX4g034574 | 4:23,347,399-23,350,475 | - | C1H4g26797 | C2H4g05921 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| CX4g031872 | 4:23,355,360-23,358,686 | + | C1H4g00917 | C2H4g03772 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| CX4g033127 | 4:23,358,993-23,360,615 | - | C1H4g12022 | C2H4g18044 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| CX4g031771 | 4:23,374,335-23,378,043 | + | C1H4g12009 | C2H4g06135 | LOC_Os04g45930 | Os04g0543200 | - | Detail |