| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16083 | 3:3,926,979-3,928,761 | - | C1H3g01138 | CX3g028992 | LOC_Os03g08800 | Os03g0186950 | - | Detail |
| C2H3g01321 | 3:3,929,010-3,931,402 | + | C1H3g25676 | CX3g028590 | LOC_Os03g08810 | Os03g0187000 | - | Detail |
| C2H3g18803 | 3:3,935,124-3,944,277 | + | C1H3g24115 | CX3g028907 | LOC_Os03g08820 | Os03g0187100 | - | Detail |
| C2H3g23594 | 3:3,945,461-3,953,875 | + | C1H3g08043 | CX3g027040 | LOC_Os03g08830 | Os03g0187300 | - | Detail |
| C2H3g16918 | 3:3,954,139-3,954,676 | - | C1H3g17315 | - | LOC_Os03g08834 | Os03g0187350 | - | Detail |
| C2H3g02517 | 3:3,958,383-3,960,827 | + | C1H3g31610 | CX3g027060 | LOC_Os03g08840 | Os03g0187400 | - | Detail |
| C2H3g15703 | 3:3,969,441-3,972,235 | - | C1H3g08919 | CX3g030287 | LOC_Os03g08850 | Os03g0187500 | - | Detail |
| C2H3g10684 | 3:3,977,594-3,979,564 | + | C1H3g13450 | CX3g026706 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| C2H3g13978 | 3:3,981,806-3,983,614 | + | C1H3g23881 | CX3g030725 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| C2H3g19491 | 3:3,984,788-3,985,984 | - | C1H3g03880 | CX3g025062 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| C2H3g07130 | 3:3,999,076-4,004,695 | + | C1H3g16094 | CX3g031032 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| C2H3g06873 | 3:4,005,682-4,006,743 | - | C1H3g05331 | CX3g024958 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| C2H3g17114 | 3:4,018,397-4,019,985 | + | C1H3g20727 | CX3g029018 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| C2H3g22297 | 3:4,025,116-4,025,502 | - | C1H3g00664 | CX3g027139 | - | Os03g0188500 | - | Detail |
| C2H3g19207 | 3:4,042,192-4,043,417 | + | C1H3g17061 | CX3g028802 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| C2H3g07421 | 3:4,050,255-4,050,785 | + | C1H3g18298 | CX3g026805 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| C2H3g08533 | 3:4,054,775-4,056,100 | - | C1H3g19818 | CX3g027676 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| C2H3g28618 | 3:4,056,771-4,057,468 | - | C1H3g18359 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C2H3g11626 | 3:4,057,480-4,058,384 | - | C1H3g16437 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C2H3g03286 | 3:4,062,516-4,062,730 | - | C1H3g29808 | CX3g030934 | LOC_Os03g09020 | Os03g0189400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034679 | 4:23,022,799-23,028,220 | + | C1H4g24867 | C2H4g06663 | LOC_Os04g45160 | Os04g0534100 | - | Detail |
| CX4g035606 | 4:23,031,921-23,036,904 | + | C1H4g25917 | C2H4g23267 | LOC_Os04g45170 | Os04g0534200 | - | Detail |
| CX4g035479 | 4:23,037,552-23,039,861 | + | C1H4g04893 | C2H4g02980 | LOC_Os04g45180 | Os04g0534300 | - | Detail |
| CX4g033395 | 4:23,041,656-23,046,230 | - | C1H4g09749 | C2H4g14817 | LOC_Os04g45200 | Os04g0534500 | - | Detail |
| CX4g032262 | 4:23,048,718-23,049,386 | + | C1H4g00533 | C2H4g22478 | LOC_Os04g45210 | Os04g0534600 | PEX11-4, OsPEX11-4 | Detail |
| CX4g033854 | 4:23,070,101-23,071,585 | - | C1H4g29726 | C2H4g14595 | LOC_Os04g45270 | Os04g0535200 | - | Detail |
| CX4g034978 | 4:23,077,011-23,079,390 | - | C1H4g01959 | C2H4g23856 | LOC_Os04g45280 | Os04g0535400 | - | Detail |
| CX4g035610 | 4:23,086,238-23,092,509 | + | C1H4g06579 | C2H4g26752 | LOC_Os04g45290 | Os04g0535600 | - | Detail |
| CX4g032877 | 4:23,099,846-23,101,928 | - | C1H4g20764 | C2H4g06470 | LOC_Os04g45330 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| CX4g036228 | 4:23,107,347-23,108,537 | - | C1H4g08042 | C2H4g12296 | LOC_Os04g45340 | Os04g0536500 | - | Detail |
| CX4g031509 | 4:23,126,975-23,127,478 | + | - | C2H4g14415 | LOC_Os04g43740 | Os04g0537100 | - | Detail |
| CX4g032484 | 4:23,135,318-23,137,930 | + | C1H4g08874 | C2H4g22304 | LOC_Os04g45460 | Os04g0537800 | - | Detail |
| CX4g032962 | 4:23,138,449-23,142,894 | - | C1H4g01755 | C2H4g19071 | LOC_Os04g45470 | Os04g0537900 | GLUP3, glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3 | Detail |
| CX4g031799 | 4:23,144,631-23,148,175 | + | C1H4g06397 | C2H4g24565 | LOC_Os04g45480 | Os04g0538000 | - | Detail |
| CX4g032979 | 4:23,149,705-23,153,379 | - | C1H4g10885 | C2H4g28058 | LOC_Os04g45490 | Os04g0538100 | - | Detail |
| CX4g033360 | 4:23,157,282-23,157,584 | + | C1H4g22277 | C2H4g05726 | - | - | - | Detail |
| CX4g032138 | 4:23,164,788-23,165,582 | - | - | C2H4g04182 | LOC_Os04g45520 | Os04g0538400 | OsVTL2 | Detail |
| CX4g034021 | 4:23,176,358-23,181,518 | - | C1H4g08093 | C2H4g08025 | LOC_Os04g45570 | Os04g0538700 | - | Detail |
| CX4g032688 | 4:23,183,501-23,188,060 | - | C1H4g10769 | C2H4g12110 | LOC_Os04g45580 | Os04g0538800 | - | Detail |
| CX4g032029 | 4:23,197,426-23,200,602 | - | C1H4g23975 | C2H4g25192 | LOC_Os04g45610 | Os04g0539100 | - | Detail |