| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21969 | 3:24,130,274-24,134,441 | + | C2H3g28256 | CX3g025231 | LOC_Os03g45320 | Os03g0655700 | - | Detail |
| C1H3g09602 | 3:24,137,352-24,138,990 | - | C2H3g14608 | CX3g027791 | LOC_Os03g45330 | Os03g0656000 | - | Detail |
| C1H3g03391 | 3:24,140,801-24,141,106 | - | C2H3g05055 | CX3g027791 | LOC_Os03g45330 | - | - | Detail |
| C1H3g13910 | 3:24,144,281-24,145,265 | - | C2H3g02509 | CX3g027133 | LOC_Os03g45340 | Os03g0656100 | - | Detail |
| C1H3g27575 | 3:24,146,309-24,147,654 | - | C2H3g14304 | CX3g025575 | LOC_Os03g45344 | Os03g0656201 | - | Detail |
| C1H3g27714 | 3:24,163,247-24,164,185 | - | C2H3g22997 | - | - | - | - | Detail |
| C1H3g10858 | 3:24,164,237-24,164,845 | - | C2H3g22826 | - | - | - | - | Detail |
| C1H3g06767 | 3:24,175,131-24,177,657 | + | C2H3g19499 | CX3g026686 | LOC_Os03g45390 | Os03g0656800 | - | Detail |
| C1H3g05969 | 3:24,177,942-24,181,683 | + | C2H3g07189 | CX3g028225 | LOC_Os03g45400 | Os03g0656900 | NUS1, V1, V<sub>1</sub> | Detail |
| C1H3g09225 | 3:24,183,479-24,186,795 | + | C2H3g10811 | CX3g030227 | LOC_Os03g45410 | Os03g0657000 | OsTBP2 | Detail |
| C1H3g18850 | 3:24,187,560-24,190,685 | - | C2H3g07935 | CX3g030290 | LOC_Os03g45420 | Os03g0657100 | - | Detail |
| C1H3g02435 | 3:24,200,053-24,200,562 | - | C2H3g03419 | CX3g029382 | LOC_Os03g45450 | Os03g0657400 | - | Detail |
| C1H3g24167 | 3:24,219,075-24,225,655 | - | C2H3g22074 | CX3g028666 | LOC_Os03g45619 | Os03g0658800 | - | Detail |
| C1H3g12006 | 3:24,226,530-24,227,437 | - | C2H3g00755 | CX3g028666 | LOC_Os03g45519 | Os03g0658000 | - | Detail |
| C1H3g24128 | 3:24,228,324-24,229,535 | - | C2H3g27863 | - | LOC_Os03g45528 | Os03g0658000 | - | Detail |
| C1H3g08032 | 3:24,252,669-24,262,291 | - | C2H3g11605 | CX3g028381 | LOC_Os03g45619 | Os03g0658800 | - | Detail |
| C1H3g00885 | 3:24,296,970-24,297,413 | + | C2H3g00843 | CX3g029438 | LOC_Os03g45710 | Os03g0659200 | - | Detail |
| C1H3g09830 | 3:24,298,207-24,300,976 | - | C2H3g07162 | CX3g029511 | LOC_Os03g45720 | Os03g0659300 | - | Detail |
| C1H3g25241 | 3:24,302,054-24,307,297 | - | C2H3g28770 | CX3g026126 | LOC_Os03g45730 | Os03g0659400 | - | Detail |
| C1H3g21268 | 3:24,309,035-24,312,640 | + | - | CX3g030075 | LOC_Os03g56740 | Os04g0578900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034679 | 4:23,022,799-23,028,220 | + | C1H4g24867 | C2H4g06663 | LOC_Os04g45160 | Os04g0534100 | - | Detail |
| CX4g035606 | 4:23,031,921-23,036,904 | + | C1H4g25917 | C2H4g23267 | LOC_Os04g45170 | Os04g0534200 | - | Detail |
| CX4g035479 | 4:23,037,552-23,039,861 | + | C1H4g04893 | C2H4g02980 | LOC_Os04g45180 | Os04g0534300 | - | Detail |
| CX4g033395 | 4:23,041,656-23,046,230 | - | C1H4g09749 | C2H4g14817 | LOC_Os04g45200 | Os04g0534500 | - | Detail |
| CX4g032262 | 4:23,048,718-23,049,386 | + | C1H4g00533 | C2H4g22478 | LOC_Os04g45210 | Os04g0534600 | PEX11-4, OsPEX11-4 | Detail |
| CX4g033854 | 4:23,070,101-23,071,585 | - | C1H4g29726 | C2H4g14595 | LOC_Os04g45270 | Os04g0535200 | - | Detail |
| CX4g034978 | 4:23,077,011-23,079,390 | - | C1H4g01959 | C2H4g23856 | LOC_Os04g45280 | Os04g0535400 | - | Detail |
| CX4g035610 | 4:23,086,238-23,092,509 | + | C1H4g06579 | C2H4g26752 | LOC_Os04g45290 | Os04g0535600 | - | Detail |
| CX4g032877 | 4:23,099,846-23,101,928 | - | C1H4g20764 | C2H4g06470 | LOC_Os04g45330 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| CX4g036228 | 4:23,107,347-23,108,537 | - | C1H4g08042 | C2H4g12296 | LOC_Os04g45340 | Os04g0536500 | - | Detail |
| CX4g031509 | 4:23,126,975-23,127,478 | + | - | C2H4g14415 | LOC_Os04g43740 | Os04g0537100 | - | Detail |
| CX4g032484 | 4:23,135,318-23,137,930 | + | C1H4g08874 | C2H4g22304 | LOC_Os04g45460 | Os04g0537800 | - | Detail |
| CX4g032962 | 4:23,138,449-23,142,894 | - | C1H4g01755 | C2H4g19071 | LOC_Os04g45470 | Os04g0537900 | GLUP3, glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3 | Detail |
| CX4g031799 | 4:23,144,631-23,148,175 | + | C1H4g06397 | C2H4g24565 | LOC_Os04g45480 | Os04g0538000 | - | Detail |
| CX4g032979 | 4:23,149,705-23,153,379 | - | C1H4g10885 | C2H4g28058 | LOC_Os04g45490 | Os04g0538100 | - | Detail |
| CX4g033360 | 4:23,157,282-23,157,584 | + | C1H4g22277 | C2H4g05726 | - | - | - | Detail |
| CX4g032138 | 4:23,164,788-23,165,582 | - | - | C2H4g04182 | LOC_Os04g45520 | Os04g0538400 | OsVTL2 | Detail |
| CX4g034021 | 4:23,176,358-23,181,518 | - | C1H4g08093 | C2H4g08025 | LOC_Os04g45570 | Os04g0538700 | - | Detail |
| CX4g032688 | 4:23,183,501-23,188,060 | - | C1H4g10769 | C2H4g12110 | LOC_Os04g45580 | Os04g0538800 | - | Detail |
| CX4g032029 | 4:23,197,426-23,200,602 | - | C1H4g23975 | C2H4g25192 | LOC_Os04g45610 | Os04g0539100 | - | Detail |