| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24320 | 1:27,562,832-27,568,060 | - | C2H1g29572 | CX1g000235 | LOC_Os01g53680 | Os01g0738800 | - | Detail |
| C1H1g12855 | 1:27,570,268-27,575,965 | - | C2H1g23624 | CX1g004470 | LOC_Os01g53700 | Os01g0739000 | - | Detail |
| C1H1g24492 | 1:27,582,823-27,590,553 | + | C2H1g10920 | CX1g005768 | LOC_Os01g53710 | Os01g0739200 | - | Detail |
| C1H1g03337 | 1:27,592,155-27,598,910 | + | C2H1g15871 | CX1g005163 | LOC_Os01g53720 | Os01g0739400 | - | Detail |
| C1H1g05863 | 1:27,599,118-27,599,744 | - | C2H1g19412 | CX1g004558 | LOC_Os01g53730 | Os01g0739500 | - | Detail |
| C1H1g02213 | 1:27,612,406-27,615,765 | + | C2H1g01037 | CX1g002993 | LOC_Os01g53750 | Os01g0739700 | - | Detail |
| C1H1g17974 | 1:27,622,570-27,624,339 | + | C2H1g07224 | CX1g004055 | LOC_Os01g53790 | - | - | Detail |
| C1H1g15341 | 1:27,626,007-27,626,669 | + | C2H1g15894 | CX1g004055 | LOC_Os01g53790 | Os01g0740400 | - | Detail |
| C1H1g11923 | 1:27,628,320-27,633,452 | - | C2H1g04268 | CX1g000355 | LOC_Os01g53800 | Os01g0740500 | - | Detail |
| C1H1g10172 | 1:27,634,930-27,639,007 | - | C2H1g07977 | CX1g002299 | LOC_Os01g53810 | Os01g0740600 | - | Detail |
| C1H1g11507 | 1:27,642,852-27,647,621 | - | C2H1g07420 | CX1g002753 | LOC_Os01g53840 | Os01g0741200 | - | Detail |
| C1H1g08023 | 1:27,653,778-27,655,968 | + | C2H1g21659 | - | - | - | - | Detail |
| C1H1g07113 | 1:27,662,880-27,666,026 | + | C2H1g06484 | CX1g006967 | LOC_Os01g53880 | Os01g0741900 | IAA6, OsIAA6 | Detail |
| C1H1g30211 | 1:27,699,562-27,703,241 | + | C2H1g04401 | CX1g007266 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| C1H1g16829 | 1:27,703,227-27,707,506 | - | C2H1g05690 | CX1g000337 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| C1H1g31036 | 1:27,709,451-27,711,043 | - | C2H1g15551 | CX1g005919 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| C1H1g12146 | 1:27,725,035-27,727,146 | + | C2H1g26459 | CX1g007218 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| C1H1g13979 | 1:27,733,408-27,736,064 | - | C2H1g30365 | CX1g003238 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| C1H1g20416 | 1:27,743,149-27,747,851 | + | C2H1g07295 | CX1g000573 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| C1H1g03969 | 1:27,747,960-27,754,344 | - | C2H1g18249 | CX1g001592 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034679 | 4:23,022,799-23,028,220 | + | C1H4g24867 | C2H4g06663 | LOC_Os04g45160 | Os04g0534100 | - | Detail |
| CX4g035606 | 4:23,031,921-23,036,904 | + | C1H4g25917 | C2H4g23267 | LOC_Os04g45170 | Os04g0534200 | - | Detail |
| CX4g035479 | 4:23,037,552-23,039,861 | + | C1H4g04893 | C2H4g02980 | LOC_Os04g45180 | Os04g0534300 | - | Detail |
| CX4g033395 | 4:23,041,656-23,046,230 | - | C1H4g09749 | C2H4g14817 | LOC_Os04g45200 | Os04g0534500 | - | Detail |
| CX4g032262 | 4:23,048,718-23,049,386 | + | C1H4g00533 | C2H4g22478 | LOC_Os04g45210 | Os04g0534600 | PEX11-4, OsPEX11-4 | Detail |
| CX4g033854 | 4:23,070,101-23,071,585 | - | C1H4g29726 | C2H4g14595 | LOC_Os04g45270 | Os04g0535200 | - | Detail |
| CX4g034978 | 4:23,077,011-23,079,390 | - | C1H4g01959 | C2H4g23856 | LOC_Os04g45280 | Os04g0535400 | - | Detail |
| CX4g035610 | 4:23,086,238-23,092,509 | + | C1H4g06579 | C2H4g26752 | LOC_Os04g45290 | Os04g0535600 | - | Detail |
| CX4g032877 | 4:23,099,846-23,101,928 | - | C1H4g20764 | C2H4g06470 | LOC_Os04g45330 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| CX4g036228 | 4:23,107,347-23,108,537 | - | C1H4g08042 | C2H4g12296 | LOC_Os04g45340 | Os04g0536500 | - | Detail |
| CX4g031509 | 4:23,126,975-23,127,478 | + | - | C2H4g14415 | LOC_Os04g43740 | Os04g0537100 | - | Detail |
| CX4g032484 | 4:23,135,318-23,137,930 | + | C1H4g08874 | C2H4g22304 | LOC_Os04g45460 | Os04g0537800 | - | Detail |
| CX4g032962 | 4:23,138,449-23,142,894 | - | C1H4g01755 | C2H4g19071 | LOC_Os04g45470 | Os04g0537900 | GLUP3, glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3 | Detail |
| CX4g031799 | 4:23,144,631-23,148,175 | + | C1H4g06397 | C2H4g24565 | LOC_Os04g45480 | Os04g0538000 | - | Detail |
| CX4g032979 | 4:23,149,705-23,153,379 | - | C1H4g10885 | C2H4g28058 | LOC_Os04g45490 | Os04g0538100 | - | Detail |
| CX4g033360 | 4:23,157,282-23,157,584 | + | C1H4g22277 | C2H4g05726 | - | - | - | Detail |
| CX4g032138 | 4:23,164,788-23,165,582 | - | - | C2H4g04182 | LOC_Os04g45520 | Os04g0538400 | OsVTL2 | Detail |
| CX4g034021 | 4:23,176,358-23,181,518 | - | C1H4g08093 | C2H4g08025 | LOC_Os04g45570 | Os04g0538700 | - | Detail |
| CX4g032688 | 4:23,183,501-23,188,060 | - | C1H4g10769 | C2H4g12110 | LOC_Os04g45580 | Os04g0538800 | - | Detail |
| CX4g032029 | 4:23,197,426-23,200,602 | - | C1H4g23975 | C2H4g25192 | LOC_Os04g45610 | Os04g0539100 | - | Detail |