| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g10979 | 1:29,560,996-29,563,839 | + | C1H1g03530 | CX1g007095 | LOC_Os01g57270 | Os01g0781100 | - | Detail |
| C2H1g08583 | 1:29,572,328-29,576,187 | + | C1H1g23430 | CX1g006355 | LOC_Os01g57280 | Os01g0781200 | Pi64 | Detail |
| C2H1g19777 | 1:29,577,746-29,582,074 | - | C1H1g05330 | CX1g001870 | LOC_Os01g57350 | Os01g0782200 | - | Detail |
| C2H1g15609 | 1:29,583,700-29,587,880 | - | C1H1g16270 | CX1g002627 | LOC_Os01g57360 | Os01g0782500 | - | Detail |
| C2H1g26173 | 1:29,594,858-29,598,908 | - | C1H1g26913 | CX1g006567 | LOC_Os01g57370 | Os01g0782800 | OsCNGC15 | Detail |
| C2H1g11682 | 1:29,600,538-29,602,950 | - | C1H1g01155 | - | LOC_Os01g57380 | - | - | Detail |
| C2H1g20034 | 1:29,608,459-29,608,843 | - | C1H1g18891 | CX1g004406 | LOC_Os01g57400 | Os01g0783000 | OsLysMe2 | Detail |
| C2H1g00339 | 1:29,614,233-29,620,750 | - | C1H1g14162 | CX1g003400 | LOC_Os01g57420 | Os01g0783200 | - | Detail |
| C2H1g03808 | 1:29,623,079-29,625,594 | - | C1H1g12309 | CX1g003974 | LOC_Os01g57440 | Os01g0783400 | - | Detail |
| C2H1g08412 | 1:29,626,290-29,629,368 | - | C1H1g16380 | CX1g004136 | LOC_Os01g57450 | Os01g0783500 | - | Detail |
| C2H1g00954 | 1:29,631,607-29,633,325 | + | C1H1g15791 | CX1g004706 | LOC_Os01g57460 | Os01g0783600 | - | Detail |
| C2H1g29910 | 1:29,636,955-29,648,497 | + | C1H1g11033 | CX1g004924 | LOC_Os01g57490 | Os01g0783900 | SDRLP-11 | Detail |
| C2H1g11023 | 1:29,651,950-29,656,765 | + | C1H1g03347 | CX1g000763 | LOC_Os01g57510 | Os01g0784200 | SDRLK-15 | Detail |
| C2H1g15908 | 1:29,662,917-29,664,948 | + | C1H1g21188 | CX1g000103 | LOC_Os01g57540 | Os01g0784500 | - | Detail |
| C2H1g25310 | 1:29,666,737-29,671,632 | + | C1H1g07023 | CX1g003790 | LOC_Os01g57550 | Os01g0784600 | - | Detail |
| C2H1g01398 | 1:29,669,989-29,677,661 | - | C1H1g21188 | CX1g000103 | LOC_Os01g57560 | Os01g0784700 | SDRLK-3 | Detail |
| C2H1g01374 | 1:29,686,538-29,690,244 | + | C1H1g11148 | CX1g002544 | LOC_Os01g57570 | Os01g0784800 | - | Detail |
| C2H1g04781 | 1:29,691,804-29,695,625 | - | C1H1g11922 | CX1g002670 | LOC_Os01g57580 | Os01g0784900 | NSP1, OsbHLH069 | Detail |
| C2H1g08294 | 1:29,695,777-29,696,037 | - | C1H1g11922 | CX1g002670 | LOC_Os01g57580 | Os01g0784900 | NSP1, OsbHLH069 | Detail |
| C2H1g25385 | 1:29,706,172-29,707,086 | - | C1H1g08010 | - | - | Os01g0834150 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034425 | 4:22,466,081-22,466,290 | - | - | - | - | - | - | Detail |
| CX4g031957 | 4:22,467,081-22,470,011 | + | C1H4g14520 | C2H4g19435 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| CX4g034351 | 4:22,479,086-22,479,418 | + | C1H4g13540 | C2H4g20077 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| CX4g035905 | 4:22,489,802-22,493,399 | - | C1H4g14130 | C2H4g17950 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| CX4g032754 | 4:22,516,744-22,517,767 | + | C1H4g23550 | C2H4g07715 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| CX4g032876 | 4:22,519,421-22,520,070 | + | C1H4g25974 | C2H4g09820 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| CX4g032188 | 4:22,520,635-22,524,145 | - | C1H4g18322 | C2H4g17435 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| CX4g033622 | 4:22,531,487-22,536,024 | - | C1H4g27685 | C2H4g30482 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| CX4g036284 | 4:22,537,186-22,537,615 | - | - | - | - | - | - | Detail |
| CX4g035705 | 4:22,539,182-22,539,352 | + | - | - | - | - | - | Detail |
| CX4g035364 | 4:22,540,559-22,540,972 | - | - | C2H4g19772 | - | - | - | Detail |
| CX4g033677 | 4:22,543,683-22,549,481 | + | C1H4g02749 | C2H4g21642 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| CX4g033839 | 4:22,572,860-22,573,393 | + | - | - | - | Os04g0524136 | - | Detail |
| CX4g035454 | 4:22,578,526-22,578,702 | - | - | - | - | - | - | Detail |
| CX4g035143 | 4:22,579,479-22,580,275 | + | C1H4g20304 | C2H4g21424 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| CX4g033172 | 4:22,583,260-22,583,484 | - | - | - | - | - | - | Detail |
| CX4g034041 | 4:22,603,971-22,606,250 | + | C1H4g10194 | C2H4g00588 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| CX4g031624 | 4:22,607,983-22,611,310 | - | C1H4g06080 | C2H4g16476 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| CX4g035938 | 4:22,625,636-22,628,598 | + | C1H4g03289 | C2H4g13558 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| CX4g032796 | 4:22,629,281-22,629,647 | - | C1H4g04192 | C2H4g06209 | - | Os04g0524950 | - | Detail |