| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g24903 | 5:21,907,575-21,910,433 | - | C2H5g27574 | CX5g040683 | LOC_Os05g46230 | Os05g0539700 | - | Detail |
| C1H5g09340 | 5:21,914,229-21,915,488 | - | C2H5g03274 | CX5g040385 | LOC_Os05g46240 | Os05g0539800 | - | Detail |
| C1H5g27591 | 5:21,919,595-21,921,994 | + | C2H5g20087 | CX5g040129 | LOC_Os05g46250 | Os05g0539900 | - | Detail |
| C1H5g14200 | 5:21,923,505-21,927,434 | + | C2H5g21500 | CX5g039216 | LOC_Os05g46260 | Os05g0540000 | OsFSE6, OsGINT1 | Detail |
| C1H5g12849 | 5:21,927,471-21,927,986 | - | C2H5g13866 | CX5g040191 | LOC_Os05g46310 | Os05g0540600 | - | Detail |
| C1H5g13283 | 5:21,928,389-21,929,544 | - | C2H5g13866 | CX5g040191 | LOC_Os05g46390 | Os05g0536800 | - | Detail |
| C1H5g10025 | 5:21,930,456-21,934,221 | - | C2H5g29925 | - | LOC_Os05g46270 | Os05g0540100 | - | Detail |
| C1H5g28338 | 5:21,934,621-21,935,485 | + | C2H5g01666 | - | LOC_Os05g46280 | Os05g0540200 | - | Detail |
| C1H5g11949 | 5:21,935,844-21,940,484 | - | C2H5g04565 | - | LOC_Os05g46290 | Os05g0540300 | - | Detail |
| C1H5g25265 | 5:21,948,078-21,948,578 | - | C2H5g24441 | CX5g040191 | LOC_Os05g46320 | Os05g0540600 | - | Detail |
| C1H5g01480 | 5:21,950,444-21,957,717 | + | C2H5g25396 | CX5g041012 | LOC_Os05g46330 | Os05g0540800 | - | Detail |
| C1H5g24700 | 5:21,959,061-21,960,191 | - | C2H5g16790 | CX5g036866 | LOC_Os05g46340 | Os05g0540900 | - | Detail |
| C1H5g20535 | 5:21,964,168-21,966,856 | + | C2H5g11235 | CX5g037419 | LOC_Os05g46350 | Os05g0541100 | - | Detail |
| C1H5g03970 | 5:21,969,724-21,971,590 | + | C2H5g11661 | CX5g037625 | LOC_Os05g46360 | Os05g0541200 | - | Detail |
| C1H5g12775 | 5:21,982,318-21,983,532 | + | C2H5g14117 | CX5g036893 | LOC_Os05g46370 | Os05g0541400 | OsLF | Detail |
| C1H5g21489 | 5:21,988,145-21,989,752 | + | C2H5g27978 | CX5g040191 | LOC_Os05g46380 | Os05g0540600 | - | Detail |
| C1H5g06562 | 5:21,998,464-22,003,666 | + | C2H5g13798 | CX5g039412 | LOC_Os05g46395 | Os05g0541700 | - | Detail |
| C1H5g30366 | 5:22,005,510-22,005,701 | - | C2H5g16362 | CX5g039337 | - | Os05g0541750 | - | Detail |
| C1H5g29960 | 5:22,007,655-22,008,529 | + | C2H5g26824 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C1H5g10948 | 5:22,009,102-22,010,634 | - | C2H5g22825 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034425 | 4:22,466,081-22,466,290 | - | - | - | - | - | - | Detail |
| CX4g031957 | 4:22,467,081-22,470,011 | + | C1H4g14520 | C2H4g19435 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| CX4g034351 | 4:22,479,086-22,479,418 | + | C1H4g13540 | C2H4g20077 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| CX4g035905 | 4:22,489,802-22,493,399 | - | C1H4g14130 | C2H4g17950 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| CX4g032754 | 4:22,516,744-22,517,767 | + | C1H4g23550 | C2H4g07715 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| CX4g032876 | 4:22,519,421-22,520,070 | + | C1H4g25974 | C2H4g09820 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| CX4g032188 | 4:22,520,635-22,524,145 | - | C1H4g18322 | C2H4g17435 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| CX4g033622 | 4:22,531,487-22,536,024 | - | C1H4g27685 | C2H4g30482 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| CX4g036284 | 4:22,537,186-22,537,615 | - | - | - | - | - | - | Detail |
| CX4g035705 | 4:22,539,182-22,539,352 | + | - | - | - | - | - | Detail |
| CX4g035364 | 4:22,540,559-22,540,972 | - | - | C2H4g19772 | - | - | - | Detail |
| CX4g033677 | 4:22,543,683-22,549,481 | + | C1H4g02749 | C2H4g21642 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| CX4g033839 | 4:22,572,860-22,573,393 | + | - | - | - | Os04g0524136 | - | Detail |
| CX4g035454 | 4:22,578,526-22,578,702 | - | - | - | - | - | - | Detail |
| CX4g035143 | 4:22,579,479-22,580,275 | + | C1H4g20304 | C2H4g21424 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| CX4g033172 | 4:22,583,260-22,583,484 | - | - | - | - | - | - | Detail |
| CX4g034041 | 4:22,603,971-22,606,250 | + | C1H4g10194 | C2H4g00588 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| CX4g031624 | 4:22,607,983-22,611,310 | - | C1H4g06080 | C2H4g16476 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| CX4g035938 | 4:22,625,636-22,628,598 | + | C1H4g03289 | C2H4g13558 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| CX4g032796 | 4:22,629,281-22,629,647 | - | C1H4g04192 | C2H4g06209 | - | Os04g0524950 | - | Detail |