| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10960 | 6:11,997,746-12,004,793 | - | C2H6g10288 | CX6g045814 | LOC_Os06g28720 | Os06g0481900 | - | Detail |
| C1H6g24995 | 6:12,083,602-12,086,393 | - | C2H6g03779 | - | - | - | - | Detail |
| C1H6g10835 | 6:12,142,225-12,148,780 | + | C2H6g19981 | CX6g045746 | LOC_Os06g28590 | Os06g0480000 | - | Detail |
| C1H6g21775 | 6:12,167,335-12,168,136 | + | C2H6g01572 | CX6g041290 | LOC_Os06g28550 | Os06g0479400 | - | Detail |
| C1H6g00087 | 6:12,169,263-12,169,520 | + | C2H6g01572 | CX6g041290 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C1H6g26693 | 6:12,207,145-12,209,632 | - | C2H6g17787 | CX6g042654 | LOC_Os06g27760 | Os06g0472000 | - | Detail |
| C1H6g28055 | 6:12,212,478-12,215,512 | + | C2H6g20307 | CX6g043194 | LOC_Os06g27770 | Os06g0472200 | - | Detail |
| C1H6g16183 | 6:12,221,012-12,222,265 | - | - | - | - | Os06g0472350 | - | Detail |
| C1H6g06716 | 6:12,226,523-12,232,936 | + | C2H6g23546 | CX6g043241 | LOC_Os06g27800 | Os06g0472400 | - | Detail |
| C1H6g31838 | 6:12,245,451-12,246,063 | + | - | - | - | - | - | Detail |
| C1H6g09283 | 6:12,245,883-12,249,225 | - | C2H6g14928 | CX6g042696 | LOC_Os06g27820 | Os06g0472600 | - | Detail |
| C1H6g24132 | 6:12,251,185-12,255,696 | - | C2H6g00222 | CX6g045749 | LOC_Os06g27830 | Os06g0472700 | - | Detail |
| C1H6g08584 | 6:12,264,810-12,266,114 | + | C2H6g02911 | CX6g043316 | LOC_Os06g27850 | Os06g0472900 | - | Detail |
| C1H6g02757 | 6:12,269,524-12,273,613 | - | C2H6g30368 | CX6g041871 | LOC_Os06g27860 | Os06g0473000 | OsPHS1 | Detail |
| C1H6g12249 | 6:12,286,405-12,297,319 | - | C2H6g00393 | CX6g044841 | LOC_Os06g27890 | Os06g0473200 | MKK3, OsMKK3 | Detail |
| C1H6g13779 | 6:12,308,768-12,309,103 | + | C2H6g27648 | CX6g045224 | - | Os06g0473700 | - | Detail |
| C1H6g03161 | 6:12,318,806-12,328,159 | - | C2H6g25625 | CX6g044575 | LOC_Os06g27970 | Os06g0474200 | OsFIP | Detail |
| C1H6g15989 | 6:12,341,598-12,345,314 | - | C2H6g05701 | CX6g043983 | LOC_Os06g28000 | Os06g0474500 | - | Detail |
| C1H6g14721 | 6:12,351,276-12,352,036 | - | C2H6g23516 | CX1g001472 | LOC_Os06g28030 | Os06g0474600 | - | Detail |
| C1H6g09338 | 6:12,367,302-12,368,758 | - | C2H6g13355 | CX6g043337 | LOC_Os06g28050 | Os06g0498450 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034425 | 4:22,466,081-22,466,290 | - | - | - | - | - | - | Detail |
| CX4g031957 | 4:22,467,081-22,470,011 | + | C1H4g14520 | C2H4g19435 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| CX4g034351 | 4:22,479,086-22,479,418 | + | C1H4g13540 | C2H4g20077 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| CX4g035905 | 4:22,489,802-22,493,399 | - | C1H4g14130 | C2H4g17950 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| CX4g032754 | 4:22,516,744-22,517,767 | + | C1H4g23550 | C2H4g07715 | LOC_Os04g44190 | Os04g0522800 | - | Detail |
| CX4g032876 | 4:22,519,421-22,520,070 | + | C1H4g25974 | C2H4g09820 | LOC_Os04g44200 | Os04g0523000 | - | Detail |
| CX4g032188 | 4:22,520,635-22,524,145 | - | C1H4g18322 | C2H4g17435 | LOC_Os04g44210 | Os04g0523100 | - | Detail |
| CX4g033622 | 4:22,531,487-22,536,024 | - | C1H4g27685 | C2H4g30482 | LOC_Os04g44220 | Os04g0523200 | - | Detail |
| CX4g036284 | 4:22,537,186-22,537,615 | - | - | - | - | - | - | Detail |
| CX4g035705 | 4:22,539,182-22,539,352 | + | - | - | - | - | - | Detail |
| CX4g035364 | 4:22,540,559-22,540,972 | - | - | C2H4g19772 | - | - | - | Detail |
| CX4g033677 | 4:22,543,683-22,549,481 | + | C1H4g02749 | C2H4g21642 | LOC_Os04g44230 | Os04g0523500 | OsCKX8 | Detail |
| CX4g033839 | 4:22,572,860-22,573,393 | + | - | - | - | Os04g0524136 | - | Detail |
| CX4g035454 | 4:22,578,526-22,578,702 | - | - | - | - | - | - | Detail |
| CX4g035143 | 4:22,579,479-22,580,275 | + | C1H4g20304 | C2H4g21424 | LOC_Os04g44280 | Os04g0524300 | RR5, rr5, OsRR5, Rra4, OsRRA4 | Detail |
| CX4g033172 | 4:22,583,260-22,583,484 | - | - | - | - | - | - | Detail |
| CX4g034041 | 4:22,603,971-22,606,250 | + | C1H4g10194 | C2H4g00588 | LOC_Os04g44290 | Os04g0524400 | - | Detail |
| CX4g031624 | 4:22,607,983-22,611,310 | - | C1H4g06080 | C2H4g16476 | LOC_Os04g44300 | Os04g0524500 | - | Detail |
| CX4g035938 | 4:22,625,636-22,628,598 | + | C1H4g03289 | C2H4g13558 | LOC_Os04g44330 | Os04g0524900 | - | Detail |
| CX4g032796 | 4:22,629,281-22,629,647 | - | C1H4g04192 | C2H4g06209 | - | Os04g0524950 | - | Detail |