| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002473 | 1:20,456,224-20,460,893 | - | C1H1g12129 | C2H1g01742 | LOC_Os01g40390 | Os01g0586000 | - | Detail |
| CX1g006042 | 1:20,463,459-20,465,426 | - | C1H1g24601 | C2H1g12891 | LOC_Os01g40400 | Os01g0586400 | OsHDA701 | Detail |
| CX1g002846 | 1:20,475,306-20,477,323 | - | C1H1g11683 | C2H1g19784 | LOC_Os01g40420 | Os01g0586600 | - | Detail |
| CX1g001647 | 1:20,479,228-20,481,524 | - | C1H1g10522 | C2H1g10755 | LOC_Os01g40430 | Os01g0586800 | - | Detail |
| CX1g007056 | 1:20,494,825-20,498,781 | - | C1H1g11543 | C2H1g11806 | LOC_Os01g40470 | Os01g0587000 | OsV-ATPase d | Detail |
| CX1g006774 | 1:20,504,462-20,507,740 | + | - | - | - | Os01g0587150 | - | Detail |
| CX1g006496 | 1:20,515,687-20,522,237 | - | C1H1g24226 | C2H1g12566 | LOC_Os01g40499 | Os01g0587400 | SDRLK-49 | Detail |
| CX1g006455 | 1:20,529,747-20,530,274 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40530 | Os01g0587500 | - | Detail |
| CX1g005550 | 1:20,532,555-20,540,181 | + | C1H4g03520 | - | LOC_Os08g33280 | Os01g0946800 | - | Detail |
| CX1g002222 | 1:20,545,467-20,546,421 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40550 | Os01g0588000 | - | Detail |
| CX1g005174 | 1:20,550,814-20,552,289 | + | C1H1g09363 | C2H1g02821 | LOC_Os01g40560 | Os01g0588100 | - | Detail |
| CX1g001885 | 1:20,553,699-20,555,743 | - | C1H1g20954 | C2H1g28194 | LOC_Os01g40570 | Os01g0588200 | - | Detail |
| CX1g006765 | 1:20,557,194-20,557,874 | - | C1H1g27905 | C2H1g12033 | - | - | - | Detail |
| CX1g000767 | 1:20,561,979-20,563,475 | - | C1H1g21269 | C2H1g29314 | LOC_Os01g40580 | Os01g0588400 | - | Detail |
| CX1g004767 | 1:20,566,641-20,570,916 | - | C1H1g13505 | C2H1g12903 | LOC_Os01g40590 | Os01g0588500 | - | Detail |
| CX1g001225 | 1:20,578,035-20,578,937 | + | C1H1g29468 | C2H1g21487 | LOC_Os01g40600 | Os01g0588600 | - | Detail |
| CX1g002671 | 1:20,580,421-20,585,019 | + | C1H1g14625 | C2H1g01426 | LOC_Os01g40610 | Os01g0588700 | - | Detail |
| CX1g002699 | 1:20,590,550-20,593,867 | + | C1H1g04980 | C2H1g18453 | LOC_Os01g40620 | Os01g0588800 | - | Detail |
| CX1g006481 | 1:20,597,538-20,601,099 | - | C1H1g04778 | C2H1g18605 | LOC_Os01g40630 | Os01g0588900 | - | Detail |
| CX1g006782 | 1:20,625,401-20,628,027 | - | C1H1g16899 | C2H1g14487 | LOC_Os01g40640 | Os01g0589000 | - | Detail |