| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g22227 | 12:19,013,370-19,015,541 | + | C2H12g13163 | CX12g017124 | LOC_Os12g38290 | Os12g0571000 | - | Detail |
| C1H12g10209 | 12:19,019,795-19,020,427 | + | C2H12g18304 | CX12g017124 | LOC_Os12g38290 | Os12g0571100 | MTI4C, MT-1-4b, OsMT1d, OsMT-I-4c | Detail |
| C1H12g31880 | 12:19,021,391-19,022,856 | + | C2H12g08353 | CX12g018738 | LOC_Os12g38310 | Os12g0571200 | - | Detail |
| C1H12g16299 | 12:19,024,822-19,025,577 | - | C2H12g09891 | CX12g015965 | LOC_Os12g38320 | Os12g0571300 | - | Detail |
| C1H12g29524 | 12:19,032,902-19,034,722 | - | C2H12g06418 | CX12g015646 | - | - | - | Detail |
| C1H12g07155 | 12:19,036,329-19,036,799 | + | - | - | - | - | - | Detail |
| C1H12g00013 | 12:19,040,147-19,040,548 | + | C2H12g12045 | CX12g018241 | LOC_Os12g38340 | Os12g0571500 | - | Detail |
| C1H12g14796 | 12:19,044,744-19,045,250 | + | C2H12g22265 | CX12g017618 | LOC_Os12g38350 | Os12g0571600 | - | Detail |
| C1H12g13878 | 12:19,046,801-19,047,160 | + | C2H12g04558 | CX12g017487 | LOC_Os12g38360 | Os12g0571700 | - | Detail |
| C1H12g00437 | 12:19,060,763-19,070,100 | + | C2H12g02202 | CX12g016737 | LOC_Os12g38380 | Os12g0571900 | - | Detail |
| C1H12g23941 | 12:19,070,769-19,075,997 | - | C2H12g06609 | CX12g017311 | LOC_Os12g38400 | Os12g0572000 | OsMYB91, OsRS2 | Detail |
| C1H12g06117 | 12:19,100,585-19,103,094 | - | C2H12g27486 | CX12g015286 | LOC_Os12g38430 | Os12g0572400 | - | Detail |
| C1H12g07709 | 12:19,106,718-19,111,044 | + | C2H12g21889 | CX12g015465 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C1H12g05641 | 12:19,112,586-19,114,684 | + | C2H12g24384 | CX12g018435 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C1H12g27935 | 12:19,116,398-19,118,041 | + | C2H12g00949 | CX12g018261 | LOC_Os12g38450 | Os12g0572700 | OsGT47A-VII | Detail |
| C1H12g25184 | 12:19,118,323-19,121,729 | - | C2H12g28145 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C1H12g23166 | 12:19,121,765-19,125,233 | - | C2H12g28556 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C1H12g11078 | 12:19,131,936-19,133,967 | + | C2H12g20492 | CX12g018587 | LOC_Os12g38480 | Os12g0573000 | - | Detail |
| C1H12g22011 | 12:19,151,194-19,153,413 | + | C2H12g06837 | CX12g016564 | LOC_Os12g38490 | Os12g0573200 | - | Detail |
| C1H12g16046 | 12:19,167,191-19,167,379 | + | C2H12g24752 | CX12g015038 | - | Os12g0573600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002473 | 1:20,456,224-20,460,893 | - | C1H1g12129 | C2H1g01742 | LOC_Os01g40390 | Os01g0586000 | - | Detail |
| CX1g006042 | 1:20,463,459-20,465,426 | - | C1H1g24601 | C2H1g12891 | LOC_Os01g40400 | Os01g0586400 | OsHDA701 | Detail |
| CX1g002846 | 1:20,475,306-20,477,323 | - | C1H1g11683 | C2H1g19784 | LOC_Os01g40420 | Os01g0586600 | - | Detail |
| CX1g001647 | 1:20,479,228-20,481,524 | - | C1H1g10522 | C2H1g10755 | LOC_Os01g40430 | Os01g0586800 | - | Detail |
| CX1g007056 | 1:20,494,825-20,498,781 | - | C1H1g11543 | C2H1g11806 | LOC_Os01g40470 | Os01g0587000 | OsV-ATPase d | Detail |
| CX1g006774 | 1:20,504,462-20,507,740 | + | - | - | - | Os01g0587150 | - | Detail |
| CX1g006496 | 1:20,515,687-20,522,237 | - | C1H1g24226 | C2H1g12566 | LOC_Os01g40499 | Os01g0587400 | SDRLK-49 | Detail |
| CX1g006455 | 1:20,529,747-20,530,274 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40530 | Os01g0587500 | - | Detail |
| CX1g005550 | 1:20,532,555-20,540,181 | + | C1H4g03520 | - | LOC_Os08g33280 | Os01g0946800 | - | Detail |
| CX1g002222 | 1:20,545,467-20,546,421 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40550 | Os01g0588000 | - | Detail |
| CX1g005174 | 1:20,550,814-20,552,289 | + | C1H1g09363 | C2H1g02821 | LOC_Os01g40560 | Os01g0588100 | - | Detail |
| CX1g001885 | 1:20,553,699-20,555,743 | - | C1H1g20954 | C2H1g28194 | LOC_Os01g40570 | Os01g0588200 | - | Detail |
| CX1g006765 | 1:20,557,194-20,557,874 | - | C1H1g27905 | C2H1g12033 | - | - | - | Detail |
| CX1g000767 | 1:20,561,979-20,563,475 | - | C1H1g21269 | C2H1g29314 | LOC_Os01g40580 | Os01g0588400 | - | Detail |
| CX1g004767 | 1:20,566,641-20,570,916 | - | C1H1g13505 | C2H1g12903 | LOC_Os01g40590 | Os01g0588500 | - | Detail |
| CX1g001225 | 1:20,578,035-20,578,937 | + | C1H1g29468 | C2H1g21487 | LOC_Os01g40600 | Os01g0588600 | - | Detail |
| CX1g002671 | 1:20,580,421-20,585,019 | + | C1H1g14625 | C2H1g01426 | LOC_Os01g40610 | Os01g0588700 | - | Detail |
| CX1g002699 | 1:20,590,550-20,593,867 | + | C1H1g04980 | C2H1g18453 | LOC_Os01g40620 | Os01g0588800 | - | Detail |
| CX1g006481 | 1:20,597,538-20,601,099 | - | C1H1g04778 | C2H1g18605 | LOC_Os01g40630 | Os01g0588900 | - | Detail |
| CX1g006782 | 1:20,625,401-20,628,027 | - | C1H1g16899 | C2H1g14487 | LOC_Os01g40640 | Os01g0589000 | - | Detail |