| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g23828 | 9:17,601,765-17,603,518 | + | C2H9g01597 | CX9g055542 | LOC_Os09g36560 | Os09g0536300 | - | Detail |
| C1H9g17095 | 9:17,614,642-17,616,771 | + | C2H9g27916 | CX9g056300 | LOC_Os09g36580 | Os09g0536400 | - | Detail |
| C1H9g11028 | 9:17,623,463-17,626,847 | - | C2H9g02676 | CX9g057416 | LOC_Os09g36600 | Os09g0536700 | - | Detail |
| C1H9g01000 | 9:17,636,599-17,637,545 | - | - | CX9g056883 | LOC_Os09g36619 | Os09g0537000 | - | Detail |
| C1H9g09511 | 9:17,636,612-17,637,136 | + | - | - | - | Os09g0537100 | - | Detail |
| C1H9g00250 | 9:17,638,382-17,640,142 | + | - | CX9g055394 | LOC_Os09g36630 | Os09g0537200 | - | Detail |
| C1H9g06888 | 9:17,640,701-17,643,243 | + | C2H9g02330 | CX9g057733 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C1H9g24907 | 9:17,662,091-17,664,927 | + | C2H9g02330 | CX9g057665 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C1H9g14336 | 9:17,666,133-17,668,101 | - | C2H9g11788 | CX9g057345 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| C1H9g12593 | 9:17,674,761-17,677,136 | - | C2H9g24881 | CX9g055095 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| C1H9g12194 | 9:17,680,020-17,682,051 | + | C2H9g25356 | CX9g057133 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| C1H9g18306 | 9:17,696,022-17,696,291 | + | - | CX9g055094 | LOC_Os09g32790 | - | - | Detail |
| C1H9g31616 | 9:17,696,176-17,702,664 | - | C2H9g21190 | CX9g055320 | LOC_Os09g32780 | - | - | Detail |
| C1H9g10922 | 9:17,704,873-17,710,590 | + | C2H9g21190 | CX9g055320 | LOC_Os09g32780 | - | - | Detail |
| C1H9g31173 | 9:17,713,997-17,715,178 | - | C2H9g08114 | CX9g055420 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| C1H9g22212 | 9:17,721,514-17,722,139 | - | C2H9g01669 | CX9g056101 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| C1H9g15664 | 9:17,722,322-17,724,204 | + | C2H9g03742 | CX9g057786 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| C1H9g23441 | 9:17,724,689-17,728,882 | - | C2H9g08362 | CX9g056628 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| C1H9g06898 | 9:17,732,438-17,733,379 | + | C2H9g06001 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| C1H9g29591 | 9:17,733,417-17,736,357 | + | C2H9g27815 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002473 | 1:20,456,224-20,460,893 | - | C1H1g12129 | C2H1g01742 | LOC_Os01g40390 | Os01g0586000 | - | Detail |
| CX1g006042 | 1:20,463,459-20,465,426 | - | C1H1g24601 | C2H1g12891 | LOC_Os01g40400 | Os01g0586400 | OsHDA701 | Detail |
| CX1g002846 | 1:20,475,306-20,477,323 | - | C1H1g11683 | C2H1g19784 | LOC_Os01g40420 | Os01g0586600 | - | Detail |
| CX1g001647 | 1:20,479,228-20,481,524 | - | C1H1g10522 | C2H1g10755 | LOC_Os01g40430 | Os01g0586800 | - | Detail |
| CX1g007056 | 1:20,494,825-20,498,781 | - | C1H1g11543 | C2H1g11806 | LOC_Os01g40470 | Os01g0587000 | OsV-ATPase d | Detail |
| CX1g006774 | 1:20,504,462-20,507,740 | + | - | - | - | Os01g0587150 | - | Detail |
| CX1g006496 | 1:20,515,687-20,522,237 | - | C1H1g24226 | C2H1g12566 | LOC_Os01g40499 | Os01g0587400 | SDRLK-49 | Detail |
| CX1g006455 | 1:20,529,747-20,530,274 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40530 | Os01g0587500 | - | Detail |
| CX1g005550 | 1:20,532,555-20,540,181 | + | C1H4g03520 | - | LOC_Os08g33280 | Os01g0946800 | - | Detail |
| CX1g002222 | 1:20,545,467-20,546,421 | - | C1H1g03796 | C2H1g20662 | LOC_Os01g40550 | Os01g0588000 | - | Detail |
| CX1g005174 | 1:20,550,814-20,552,289 | + | C1H1g09363 | C2H1g02821 | LOC_Os01g40560 | Os01g0588100 | - | Detail |
| CX1g001885 | 1:20,553,699-20,555,743 | - | C1H1g20954 | C2H1g28194 | LOC_Os01g40570 | Os01g0588200 | - | Detail |
| CX1g006765 | 1:20,557,194-20,557,874 | - | C1H1g27905 | C2H1g12033 | - | - | - | Detail |
| CX1g000767 | 1:20,561,979-20,563,475 | - | C1H1g21269 | C2H1g29314 | LOC_Os01g40580 | Os01g0588400 | - | Detail |
| CX1g004767 | 1:20,566,641-20,570,916 | - | C1H1g13505 | C2H1g12903 | LOC_Os01g40590 | Os01g0588500 | - | Detail |
| CX1g001225 | 1:20,578,035-20,578,937 | + | C1H1g29468 | C2H1g21487 | LOC_Os01g40600 | Os01g0588600 | - | Detail |
| CX1g002671 | 1:20,580,421-20,585,019 | + | C1H1g14625 | C2H1g01426 | LOC_Os01g40610 | Os01g0588700 | - | Detail |
| CX1g002699 | 1:20,590,550-20,593,867 | + | C1H1g04980 | C2H1g18453 | LOC_Os01g40620 | Os01g0588800 | - | Detail |
| CX1g006481 | 1:20,597,538-20,601,099 | - | C1H1g04778 | C2H1g18605 | LOC_Os01g40630 | Os01g0588900 | - | Detail |
| CX1g006782 | 1:20,625,401-20,628,027 | - | C1H1g16899 | C2H1g14487 | LOC_Os01g40640 | Os01g0589000 | - | Detail |